Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD73B-201ENST00000364394 72 ntBASIC4.2□□□□□ -1.74
USP46P62068 RN7SKP202-201ENST00000410439 330 ntBASIC4.2□□□□□ -1.74
USP46P62068 RN7SKP27-201ENST00000410684 333 ntBASIC4.2□□□□□ -1.74
USP46P62068 CYCSP19-201ENST00000411715 316 ntBASIC4.2□□□□□ -1.74
USP46P62068 RN7SL542P-201ENST00000467147 294 ntBASIC4.2□□□□□ -1.74
USP46P62068 RPL21P129-201ENST00000491732 478 ntBASIC4.2□□□□□ -1.74
USP46P62068 RNU6-1096P-201ENST00000517089 102 ntBASIC4.2□□□□□ -1.74
USP46P62068 AC091167.4-201ENST00000605079 184 ntBASIC4.2□□□□□ -1.74
USP46P62068 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
USP46P62068 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
USP46P62068 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP46P62068 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
USP46P62068 RNU6-756P-201ENST00000383997 107 ntBASIC4.19□□□□□ -1.74
USP46P62068 AC007064.1-201ENST00000412238 351 ntBASIC4.19□□□□□ -1.74
USP46P62068 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.19□□□□□ -1.74
USP46P62068 CALM2P4-201ENST00000430810 426 ntBASIC4.19□□□□□ -1.74
USP46P62068 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.19□□□□□ -1.74
USP46P62068 SNORA71B-202ENST00000439232 272 ntBASIC4.19□□□□□ -1.74
USP46P62068 HMGN2P32-201ENST00000444648 269 ntBASIC4.19□□□□□ -1.74
USP46P62068 AL133162.1-201ENST00000463228 453 ntBASIC4.19□□□□□ -1.74
USP46P62068 RNA5SP309-201ENST00000516670 106 ntBASIC4.19□□□□□ -1.74
USP46P62068 RNU6-1270P-201ENST00000517128 108 ntBASIC4.19□□□□□ -1.74
USP46P62068 RNA5SP179-201ENST00000517284 121 ntBASIC4.19□□□□□ -1.74
USP46P62068 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.19□□□□□ -1.74
USP46P62068 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.19□□□□□ -1.74
USP46P62068 YPEL5P3-201ENST00000547227 352 ntBASIC4.19□□□□□ -1.74
USP46P62068 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
USP46P62068 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
USP46P62068 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
USP46P62068 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP46P62068 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.18□□□□□ -1.74
USP46P62068 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP46P62068 MIR423-201ENST00000362201 94 ntBASIC4.18□□□□□ -1.74
USP46P62068 Y_RNA.85-201ENST00000363014 111 ntBASIC4.18□□□□□ -1.74
USP46P62068 RNU6-905P-201ENST00000384434 107 ntBASIC4.18□□□□□ -1.74
USP46P62068 SNORD72-201ENST00000390994 80 ntBASIC4.18□□□□□ -1.74
USP46P62068 AL590004.2-201ENST00000404787 371 ntBASIC4.18□□□□□ -1.74
USP46P62068 AL513477.1-202ENST00000417061 214 ntBASIC4.18□□□□□ -1.74
USP46P62068 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.18□□□□□ -1.74
USP46P62068 HMGN2P18-201ENST00000450680 270 ntBASIC4.18□□□□□ -1.74
USP46P62068 SNORA31.1-201ENST00000515993 133 ntBASIC4.18□□□□□ -1.74
USP46P62068 SNORA31.5-201ENST00000516190 133 ntBASIC4.18□□□□□ -1.74
USP46P62068 RNU2-34P-201ENST00000516534 121 ntBASIC4.18□□□□□ -1.74
USP46P62068 RNA5SP490-201ENST00000517141 136 ntBASIC4.18□□□□□ -1.74
USP46P62068 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
USP46P62068 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
USP46P62068 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP46P62068 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP46P62068 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USP46P62068 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
USP46P62068 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.18□□□□□ -1.74
USP46P62068 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP46P62068 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP46P62068 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP46P62068 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP46P62068 RNU6-766P-201ENST00000362478 107 ntBASIC4.17□□□□□ -1.74
USP46P62068 Y_RNA.163-201ENST00000363702 113 ntBASIC4.17□□□□□ -1.74
USP46P62068 RNU6-294P-201ENST00000364999 102 ntBASIC4.17□□□□□ -1.74
USP46P62068 Y_RNA.348-201ENST00000365403 103 ntBASIC4.17□□□□□ -1.74
USP46P62068 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP46P62068 RNU6-1083P-201ENST00000384022 107 ntBASIC4.17□□□□□ -1.74
USP46P62068 SNORA51.5-201ENST00000384126 131 ntBASIC4.17□□□□□ -1.74
USP46P62068 Y_RNA.549-201ENST00000384657 102 ntBASIC4.17□□□□□ -1.74
USP46P62068 MIR570-201ENST00000384917 97 ntBASIC4.17□□□□□ -1.74
USP46P62068 MIR1302-5-201ENST00000408164 150 ntBASIC4.17□□□□□ -1.74
USP46P62068 MIR1253-201ENST00000408273 105 ntBASIC4.17□□□□□ -1.74
USP46P62068 SNORA84-201ENST00000459229 133 ntBASIC4.17□□□□□ -1.74
USP46P62068 RNA5SP236-201ENST00000516169 116 ntBASIC4.17□□□□□ -1.74
USP46P62068 RNU1-45P-201ENST00000517191 141 ntBASIC4.17□□□□□ -1.74
USP46P62068 AC023632.4-201ENST00000517783 191 ntBASIC4.17□□□□□ -1.74
USP46P62068 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.17□□□□□ -1.74
USP46P62068 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.17□□□□□ -1.74
USP46P62068 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.17□□□□□ -1.74
USP46P62068 MIR5685-201ENST00000579080 79 ntBASIC4.17□□□□□ -1.74
USP46P62068 MIR4644-201ENST00000579929 84 ntBASIC4.17□□□□□ -1.74
USP46P62068 AC107294.3-201ENST00000609211 526 ntBASIC4.17□□□□□ -1.74
USP46P62068 AC009831.4-201ENST00000620744 325 ntBASIC4.17□□□□□ -1.74
USP46P62068 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.17□□□□□ -1.74
USP46P62068 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.17□□□□□ -1.74
USP46P62068 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP46P62068 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP46P62068 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP46P62068 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.16□□□□□ -1.74
USP46P62068 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
USP46P62068 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.16□□□□□ -1.74
USP46P62068 RNA5SP136-201ENST00000410906 107 ntBASIC4.16□□□□□ -1.74
USP46P62068 AC009414.1-201ENST00000427200 443 ntBASIC4.16□□□□□ -1.74
USP46P62068 AC018634.1-201ENST00000437554 401 ntBASIC4.16□□□□□ -1.74
USP46P62068 AC025554.1-201ENST00000505641 188 ntBASIC4.16□□□□□ -1.74
USP46P62068 RAC1P2-201ENST00000511164 579 ntBASIC4.16□□□□□ -1.74
USP46P62068 MRPS17P9-201ENST00000511924 393 ntBASIC4.16□□□□□ -1.74
USP46P62068 SCARNA17.1-201ENST00000516211 143 ntBASIC4.16□□□□□ -1.74
USP46P62068 SCARNA17.2-201ENST00000516334 143 ntBASIC4.16□□□□□ -1.74
USP46P62068 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.16□□□□□ -1.74
USP46P62068 AC090115.4-201ENST00000609970 188 ntBASIC4.16□□□□□ -1.74
USP46P62068 SCARNA17.4-201ENST00000614296 143 ntBASIC4.16□□□□□ -1.74
USP46P62068 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.16□□□□□ -1.74
USP46P62068 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP46P62068 MIR1248-201ENST00000629190 106 ntBASIC4.16□□□□□ -1.74
USP46P62068 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms