Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC006001.4-201ENST00000622243 395 ntBASIC1.21□□□□□ -2.22
CDH4P55283 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH4P55283 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
CDH4P55283 snoU2-30.2-201ENST00000362805 70 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RNY3P3-201ENST00000363816 102 ntBASIC1.2□□□□□ -2.22
CDH4P55283 SNORA72.2-201ENST00000365028 127 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RNU6-968P-201ENST00000384076 107 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RNU6-1235P-201ENST00000384559 107 ntBASIC1.2□□□□□ -2.22
CDH4P55283 EIF1P1-201ENST00000421436 341 ntBASIC1.2□□□□□ -2.22
CDH4P55283 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH4P55283 MTCO2P7-201ENST00000446518 666 ntBASIC1.2□□□□□ -2.22
CDH4P55283 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.2□□□□□ -2.22
CDH4P55283 RNU7-187P-201ENST00000458985 68 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RNU7-34P-201ENST00000459394 64 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RNU6-498P-201ENST00000459468 107 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RNU7-66P-201ENST00000459469 62 ntBASIC1.2□□□□□ -2.22
CDH4P55283 AC007215.1-201ENST00000464893 276 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RPL30P7-201ENST00000479312 323 ntBASIC1.2□□□□□ -2.22
CDH4P55283 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH4P55283 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH4P55283 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
CDH4P55283 AC026371.1-201ENST00000551867 419 ntBASIC1.2□□□□□ -2.22
CDH4P55283 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH4P55283 MIR1321-201ENST00000637766 79 ntBASIC1.2□□□□□ -2.22
CDH4P55283 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.2□□□□□ -2.22
CDH4P55283 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
CDH4P55283 SNORD50.1-201ENST00000362987 71 ntBASIC1.19□□□□□ -2.22
CDH4P55283 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
CDH4P55283 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
CDH4P55283 RNU6-1305P-201ENST00000364353 104 ntBASIC1.19□□□□□ -2.22
CDH4P55283 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
CDH4P55283 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
CDH4P55283 Y_RNA.373-201ENST00000365600 103 ntBASIC1.19□□□□□ -2.22
CDH4P55283 RNU6-975P-201ENST00000384296 105 ntBASIC1.19□□□□□ -2.22
CDH4P55283 Y_RNA.517-201ENST00000384551 106 ntBASIC1.19□□□□□ -2.22
CDH4P55283 MIR521-1-201ENST00000384902 87 ntBASIC1.19□□□□□ -2.22
CDH4P55283 MIR487A-201ENST00000385009 80 ntBASIC1.19□□□□□ -2.22
CDH4P55283 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CDH4P55283 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH4P55283 AC016907.1-201ENST00000419483 435 ntBASIC1.19□□□□□ -2.22
CDH4P55283 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
CDH4P55283 NDUFA5P4-201ENST00000436704 385 ntBASIC1.19□□□□□ -2.22
CDH4P55283 HMGN2P34-201ENST00000437647 269 ntBASIC1.19□□□□□ -2.22
CDH4P55283 AC009237.7-201ENST00000447357 229 ntBASIC1.19□□□□□ -2.22
CDH4P55283 MTCO3P8-201ENST00000453691 755 ntBASIC1.19□□□□□ -2.22
CDH4P55283 MTND1P11-201ENST00000456661 876 ntBASIC1.19□□□□□ -2.22
CDH4P55283 AL163195.1-201ENST00000496941 348 ntBASIC1.19□□□□□ -2.22
CDH4P55283 AC093852.1-201ENST00000503587 266 ntBASIC1.19□□□□□ -2.22
CDH4P55283 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
CDH4P55283 RNU6-506P-201ENST00000516553 94 ntBASIC1.19□□□□□ -2.22
CDH4P55283 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH4P55283 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
CDH4P55283 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH4P55283 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
CDH4P55283 AL365434.2-201ENST00000607979 234 ntBASIC1.19□□□□□ -2.22
CDH4P55283 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH4P55283 AC099654.12-201ENST00000639868 649 ntBASIC1.19□□□□□ -2.22
CDH4P55283 RNU6-1090P-201ENST00000364065 94 ntBASIC1.18□□□□□ -2.22
CDH4P55283 RNU6-128P-201ENST00000383976 107 ntBASIC1.18□□□□□ -2.22
CDH4P55283 RNU6-417P-201ENST00000384712 107 ntBASIC1.18□□□□□ -2.22
CDH4P55283 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
CDH4P55283 MIR513A1-201ENST00000385138 129 ntBASIC1.18□□□□□ -2.22
CDH4P55283 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.18□□□□□ -2.22
CDH4P55283 MIR1253-201ENST00000408273 105 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.18□□□□□ -2.22
CDH4P55283 AC074290.1-201ENST00000448883 135 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC079354.2-201ENST00000453523 154 ntBASIC1.18□□□□□ -2.22
CDH4P55283 RPL23AP75-201ENST00000491601 451 ntBASIC1.18□□□□□ -2.22
CDH4P55283 RNU6-1146P-201ENST00000516282 102 ntBASIC1.18□□□□□ -2.22
CDH4P55283 Y_RNA.676-201ENST00000516393 96 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC245505.1-201ENST00000556398 224 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH4P55283 MIR4781-201ENST00000585250 76 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC146944.4-201ENST00000602697 718 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC040896.1-201ENST00000613819 479 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AL138726.1-201ENST00000614873 333 ntBASIC1.18□□□□□ -2.22
CDH4P55283 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
CDH4P55283 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH4P55283 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDH4P55283 RNU6-1252P-201ENST00000363054 104 ntBASIC1.17□□□□□ -2.22
CDH4P55283 Y_RNA.151-201ENST00000363566 112 ntBASIC1.17□□□□□ -2.22
CDH4P55283 Y_RNA.436-201ENST00000384097 102 ntBASIC1.17□□□□□ -2.22
CDH4P55283 RNU6-95P-201ENST00000384697 107 ntBASIC1.17□□□□□ -2.22
CDH4P55283 AL590002.1-201ENST00000406554 418 ntBASIC1.17□□□□□ -2.22
CDH4P55283 RNU6-57P-201ENST00000411348 103 ntBASIC1.17□□□□□ -2.22
CDH4P55283 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH4P55283 AL590632.1-201ENST00000424289 371 ntBASIC1.17□□□□□ -2.22
CDH4P55283 MTND3P21-201ENST00000433774 331 ntBASIC1.17□□□□□ -2.22
CDH4P55283 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.17□□□□□ -2.22
CDH4P55283 MTCO3P18-201ENST00000440206 761 ntBASIC1.17□□□□□ -2.22
CDH4P55283 HMGN1P12-201ENST00000499125 195 ntBASIC1.17□□□□□ -2.22
CDH4P55283 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH4P55283 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
CDH4P55283 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
CDH4P55283 AC016957.1-201ENST00000534895 309 ntBASIC1.17□□□□□ -2.22
CDH4P55283 ZNF519P2-201ENST00000557032 169 ntBASIC1.17□□□□□ -2.22
CDH4P55283 SNRPGP20-201ENST00000604477 205 ntBASIC1.17□□□□□ -2.22
CDH4P55283 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH4P55283 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.17□□□□□ -2.22
CDH4P55283 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms