Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RNA5SP494-201ENST00000410653 129 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.1□□□□□ -1.91
ATXN1P54253 SEPT7P4-201ENST00000437076 306 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 AC012308.1-201ENST00000451232 178 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 AC146507.2-201ENST00000460608 476 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 SCARNA17.1-201ENST00000516211 143 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 SCARNA17.2-201ENST00000516334 143 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 RNU6-911P-201ENST00000516523 104 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 RN7SKP272-201ENST00000516988 232 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 CR383656.8-201ENST00000549046 145 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 SCARNA17.4-201ENST00000614296 143 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 Y_RNA.778-201ENST00000620203 90 ntBASIC3.1□□□□□ -1.91
ATXN1P54253 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.1□□□□□ -1.91
ATXN1P54253 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATXN1P54253 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATXN1P54253 SNORD56.1-201ENST00000362913 68 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 Y_RNA.369-201ENST00000365568 117 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 Y_RNA.435-201ENST00000384095 112 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 RNU6-700P-201ENST00000391043 107 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 RNY4P30-201ENST00000410216 95 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 RNU4-30P-201ENST00000410245 143 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.09□□□□□ -1.91
ATXN1P54253 AC079354.2-201ENST00000453523 154 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
ATXN1P54253 AP001025.1-201ENST00000486139 332 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 Y_RNA.679-201ENST00000516416 91 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 RNU6-589P-201ENST00000516485 107 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 SCARNA11.3-201ENST00000517276 130 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 RPL21P9-201ENST00000556149 474 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.09□□□□□ -1.91
ATXN1P54253 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.09□□□□□ -1.91
ATXN1P54253 AL590808.1-201ENST00000618696 141 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 AC024581.2-201ENST00000619986 252 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.09□□□□□ -1.91
ATXN1P54253 MIR3658-201ENST00000636291 56 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATXN1P54253 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
ATXN1P54253 AC009541.1-201ENST00000438279 2662 ntBASIC3.09□□□□□ -1.91
ATXN1P54253 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATXN1P54253 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
ATXN1P54253 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATXN1P54253 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
ATXN1P54253 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATXN1P54253 Y_RNA.275-201ENST00000364726 110 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 Y_RNA.504-201ENST00000384481 104 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 RNU6-1064P-201ENST00000410626 104 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.08□□□□□ -1.92
ATXN1P54253 AC074117.2-201ENST00000417130 397 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AC007098.1-201ENST00000420122 367 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AC063976.3-201ENST00000426849 329 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 RPS15AP7-201ENST00000439294 405 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AC243964.1-201ENST00000441814 261 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.08□□□□□ -1.92
ATXN1P54253 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AC008413.1-201ENST00000511864 177 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AC009163.5-201ENST00000575421 637 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 AL391813.1-201ENST00000603098 260 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATXN1P54253 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
ATXN1P54253 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATXN1P54253 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATXN1P54253 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATXN1P54253 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATXN1P54253 RNY1P11-201ENST00000363759 113 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RNU4-84P-201ENST00000364200 139 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 Y_RNA.412-201ENST00000384001 104 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RNU6-1083P-201ENST00000384022 107 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RNU6-1289P-201ENST00000384431 106 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RNA5SP274-201ENST00000410484 108 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 AL590556.1-201ENST00000423231 483 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.07□□□□□ -1.92
ATXN1P54253 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.07□□□□□ -1.92
ATXN1P54253 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 AC132942.1-201ENST00000486753 483 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 HMGB3P3-201ENST00000510526 400 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.07□□□□□ -1.92
ATXN1P54253 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.07□□□□□ -1.92
ATXN1P54253 MIR548X2-201ENST00000579776 100 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.07□□□□□ -1.92
ATXN1P54253 AC240442.1-201ENST00000616055 283 ntBASIC3.07□□□□□ -1.92
ATXN1P54253 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATXN1P54253 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ATXN1P54253 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATXN1P54253 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATXN1P54253 RNU6-834P-201ENST00000362367 110 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 Y_RNA.358-201ENST00000365491 99 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATXN1P54253 RNU6-19P-201ENST00000384718 107 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 RNU6-476P-201ENST00000384726 107 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ATXN1P54253 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
ATXN1P54253 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.06□□□□□ -1.92
ATXN1P54253 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms