Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-1077P-201ENST00000410506 102 ntBASIC4.74□□□□□ -1.65
NUBP1P53384 AC009414.1-201ENST00000427200 443 ntBASIC4.74□□□□□ -1.65
NUBP1P53384 SNORA71B-202ENST00000439232 272 ntBASIC4.74□□□□□ -1.65
NUBP1P53384 RN7SL98P-201ENST00000462271 300 ntBASIC4.74□□□□□ -1.65
NUBP1P53384 UCA1.1-201ENST00000620952 75 ntBASIC4.74□□□□□ -1.65
NUBP1P53384 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUBP1P53384 AC073346.2-201ENST00000624724 2058 ntBASIC4.74□□□□□ -1.65
NUBP1P53384 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
NUBP1P53384 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
NUBP1P53384 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NUBP1P53384 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.73□□□□□ -1.65
NUBP1P53384 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NUBP1P53384 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NUBP1P53384 RNU6-633P-201ENST00000362612 103 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 SNORD115-2-201ENST00000362842 82 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 SNORD115-20-201ENST00000365099 82 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 RNU6-424P-201ENST00000384367 105 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 MIR483-201ENST00000385070 76 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.73□□□□□ -1.65
NUBP1P53384 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.73□□□□□ -1.65
NUBP1P53384 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.73□□□□□ -1.65
NUBP1P53384 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 ELOCP29-201ENST00000588193 334 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUBP1P53384 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUBP1P53384 AL022311.1-201ENST00000623726 19416 ntBASIC4.73□□□□□ -1.65
NUBP1P53384 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.73□□□□□ -1.65
NUBP1P53384 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NUBP1P53384 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NUBP1P53384 AC017071.1-201ENST00000564407 2204 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-34-201ENST00000362441 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-12-201ENST00000362583 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-29-201ENST00000362834 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-9-201ENST00000362912 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-21-201ENST00000362963 81 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-14-201ENST00000363090 81 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-41-201ENST00000363608 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-11-201ENST00000363616 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-5-201ENST00000363633 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-39-201ENST00000363694 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-4-201ENST00000363810 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-6-201ENST00000363942 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-42-201ENST00000364273 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-15-201ENST00000364809 81 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-26-201ENST00000365067 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-10-201ENST00000365073 81 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 Y_RNA.316-201ENST00000365118 111 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-43-201ENST00000365503 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SNORD115-36-201ENST00000365629 82 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 MIR218-1-201ENST00000384999 110 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 MIR708-201ENST00000390708 88 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 RNU6ATAC-201ENST00000408749 126 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.72□□□□□ -1.65
NUBP1P53384 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
NUBP1P53384 RN7SKP18-201ENST00000516005 275 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 RNU1-45P-201ENST00000517191 141 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 RN7SL176P-201ENST00000580352 264 ntBASIC4.72□□□□□ -1.65
NUBP1P53384 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.72□□□□□ -1.65
NUBP1P53384 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUBP1P53384 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUBP1P53384 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUBP1P53384 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
NUBP1P53384 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.72□□□□□ -1.65
NUBP1P53384 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUBP1P53384 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
NUBP1P53384 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.71□□□□□ -1.65
NUBP1P53384 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NUBP1P53384 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.71□□□□□ -1.66
NUBP1P53384 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 AC092881.1-201ENST00000638218 2733 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.71□□□□□ -1.66
NUBP1P53384 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.66
NUBP1P53384 MIR889-201ENST00000401280 79 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 AL645608.4-201ENST00000423619 154 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 RN7SL197P-201ENST00000466981 299 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 RN7SL812P-201ENST00000493791 279 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 AC108729.3-201ENST00000513484 108 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 RNA5SP33-201ENST00000516687 98 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 SNX18P1Y-201ENST00000616231 511 ntBASIC4.71□□□□□ -1.66
NUBP1P53384 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
NUBP1P53384 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NUBP1P53384 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
NUBP1P53384 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NUBP1P53384 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUBP1P53384 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
NUBP1P53384 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUBP1P53384 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUBP1P53384 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUBP1P53384 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
NUBP1P53384 SNORA71.3-201ENST00000362582 128 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 Z92545.1-201ENST00000411782 234 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.7□□□□□ -1.66
NUBP1P53384 ATP5J2P3-201ENST00000451550 258 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 CYCSP35-201ENST00000451978 304 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms