Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC008885.1-201ENST00000514930 301 ntBASIC3.38□□□□□ -1.87
CDR1P51861 RNA5SP468-201ENST00000516782 93 ntBASIC3.38□□□□□ -1.87
CDR1P51861 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
CDR1P51861 AC115990.1-201ENST00000526957 301 ntBASIC3.38□□□□□ -1.87
CDR1P51861 MIR4431-201ENST00000579990 94 ntBASIC3.38□□□□□ -1.87
CDR1P51861 AC090616.3-201ENST00000582184 217 ntBASIC3.38□□□□□ -1.87
CDR1P51861 AC006380.1-201ENST00000603598 186 ntBASIC3.38□□□□□ -1.87
CDR1P51861 uc_338.25-201ENST00000613756 156 ntBASIC3.38□□□□□ -1.87
CDR1P51861 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.38□□□□□ -1.87
CDR1P51861 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDR1P51861 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDR1P51861 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
CDR1P51861 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDR1P51861 MIR422A-201ENST00000362286 90 ntBASIC3.37□□□□□ -1.87
CDR1P51861 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
CDR1P51861 Y_RNA.127-201ENST00000363386 109 ntBASIC3.37□□□□□ -1.87
CDR1P51861 RNU6-727P-201ENST00000363592 107 ntBASIC3.37□□□□□ -1.87
CDR1P51861 SNORA18.3-201ENST00000384122 132 ntBASIC3.37□□□□□ -1.87
CDR1P51861 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
CDR1P51861 AL591034.1-201ENST00000407447 340 ntBASIC3.37□□□□□ -1.87
CDR1P51861 U3.40-201ENST00000408706 208 ntBASIC3.37□□□□□ -1.87
CDR1P51861 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
CDR1P51861 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.37□□□□□ -1.87
CDR1P51861 RN7SKP164-201ENST00000516138 266 ntBASIC3.37□□□□□ -1.87
CDR1P51861 RNU6-436P-201ENST00000516171 114 ntBASIC3.37□□□□□ -1.87
CDR1P51861 CYP4A27P-201ENST00000567218 190 ntBASIC3.37□□□□□ -1.87
CDR1P51861 MIR5004-201ENST00000579078 107 ntBASIC3.37□□□□□ -1.87
CDR1P51861 AL137843.1-201ENST00000605078 385 ntBASIC3.37□□□□□ -1.87
CDR1P51861 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDR1P51861 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RNU6-103P-201ENST00000363686 107 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RNU6-899P-201ENST00000363947 107 ntBASIC3.36□□□□□ -1.87
CDR1P51861 Y_RNA.218-201ENST00000364218 104 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RNU6-1264P-201ENST00000383891 107 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RNU6-578P-201ENST00000390980 103 ntBASIC3.36□□□□□ -1.87
CDR1P51861 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.36□□□□□ -1.87
CDR1P51861 MIR320B2-201ENST00000408479 138 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RPL30P13-201ENST00000418873 348 ntBASIC3.36□□□□□ -1.87
CDR1P51861 YPEL5P1-201ENST00000419731 367 ntBASIC3.36□□□□□ -1.87
CDR1P51861 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.36□□□□□ -1.87
CDR1P51861 MTND4LP9-201ENST00000427694 174 ntBASIC3.36□□□□□ -1.87
CDR1P51861 AL137159.1-201ENST00000452808 512 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RPS29P20-201ENST00000489592 171 ntBASIC3.36□□□□□ -1.87
CDR1P51861 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
CDR1P51861 RNU6-711P-201ENST00000517255 106 ntBASIC3.36□□□□□ -1.87
CDR1P51861 DEFB131C-201ENST00000528817 165 ntBASIC3.36□□□□□ -1.87
CDR1P51861 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.36□□□□□ -1.87
CDR1P51861 AC021739.1-201ENST00000559631 174 ntBASIC3.36□□□□□ -1.87
CDR1P51861 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.36□□□□□ -1.87
CDR1P51861 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.36□□□□□ -1.87
CDR1P51861 MIR4744-201ENST00000581563 82 ntBASIC3.36□□□□□ -1.87
CDR1P51861 AC005520.5-201ENST00000613926 164 ntBASIC3.36□□□□□ -1.87
CDR1P51861 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDR1P51861 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDR1P51861 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDR1P51861 Z82195.2-201ENST00000612348 18351 ntBASIC3.35□□□□□ -1.87
CDR1P51861 RNU6-801P-201ENST00000364087 105 ntBASIC3.35□□□□□ -1.87
CDR1P51861 RNU4-11P-201ENST00000365287 132 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
CDR1P51861 AL139281.1-201ENST00000422120 335 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AL135790.2-201ENST00000437701 267 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AC025750.2-201ENST00000442609 450 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AC107027.2-201ENST00000512197 115 ntBASIC3.35□□□□□ -1.87
CDR1P51861 RNU6-1333P-201ENST00000516162 93 ntBASIC3.35□□□□□ -1.87
CDR1P51861 SNORA25.12-201ENST00000516202 82 ntBASIC3.35□□□□□ -1.87
CDR1P51861 RNU6-971P-201ENST00000516920 106 ntBASIC3.35□□□□□ -1.87
CDR1P51861 ACA59.2-201ENST00000517061 156 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AC136628.3-201ENST00000521868 290 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AC021269.2-201ENST00000532318 330 ntBASIC3.35□□□□□ -1.87
CDR1P51861 MIR3136-201ENST00000583498 78 ntBASIC3.35□□□□□ -1.87
CDR1P51861 SNRPGP20-201ENST00000604477 205 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AC069294.1-201ENST00000608397 350 ntBASIC3.35□□□□□ -1.87
CDR1P51861 AL110115.1-201ENST00000614396 364 ntBASIC3.35□□□□□ -1.87
CDR1P51861 SNORD98-201ENST00000636377 67 ntBASIC3.35□□□□□ -1.87
CDR1P51861 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.35□□□□□ -1.87
CDR1P51861 FAM35BP-202ENST00000497389 3337 ntBASIC3.35□□□□□ -1.87
CDR1P51861 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
CDR1P51861 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDR1P51861 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDR1P51861 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
CDR1P51861 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CDR1P51861 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDR1P51861 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.34□□□□□ -1.87
CDR1P51861 CUL1P1-201ENST00000509510 2425 ntBASIC3.34□□□□□ -1.87
CDR1P51861 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.34□□□□□ -1.87
CDR1P51861 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDR1P51861 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CDR1P51861 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDR1P51861 RNU6-324P-201ENST00000363957 106 ntBASIC3.34□□□□□ -1.87
CDR1P51861 RNU6-454P-201ENST00000364292 107 ntBASIC3.34□□□□□ -1.87
CDR1P51861 RNU6-44P-201ENST00000384045 107 ntBASIC3.34□□□□□ -1.87
CDR1P51861 MIR208B-201ENST00000401172 77 ntBASIC3.34□□□□□ -1.87
CDR1P51861 AC099548.1-201ENST00000421443 426 ntBASIC3.34□□□□□ -1.87
CDR1P51861 AL035461.1-201ENST00000421490 332 ntBASIC3.34□□□□□ -1.87
CDR1P51861 BPY2DP-201ENST00000422208 265 ntBASIC3.34□□□□□ -1.87
CDR1P51861 UBE2DNL-203ENST00000474922 222 ntBASIC3.34□□□□□ -1.87
CDR1P51861 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
CDR1P51861 AC022616.8-201ENST00000533569 253 ntBASIC3.34□□□□□ -1.87
CDR1P51861 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.34□□□□□ -1.87
CDR1P51861 DNAJC19P2-201ENST00000593340 302 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms