Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF144AP50876 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RNF144AP50876 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF144AP50876 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF144AP50876 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RNF144AP50876 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF144AP50876 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RNF144AP50876 RNU1-22P-201ENST00000363334 158 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 Y_RNA.366-201ENST00000365540 102 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 RPS3AP1-201ENST00000413190 320 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.79□□□□□ -1.8
RNF144AP50876 RNU7-172P-201ENST00000517125 64 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 RN7SL703P-201ENST00000578485 302 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
RNF144AP50876 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF144AP50876 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
RNF144AP50876 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF144AP50876 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RNF144AP50876 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF144AP50876 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF144AP50876 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RNF144AP50876 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF144AP50876 RNA5SP173-201ENST00000364857 136 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 RNU6-1292P-201ENST00000383856 107 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 HMGN2P31-201ENST00000432430 273 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 AC091167.1-201ENST00000492017 396 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF144AP50876 RN7SL600P-201ENST00000581811 299 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 MIR4438-201ENST00000585271 93 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF144AP50876 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 AC062037.1-201ENST00000605302 128 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 RNU6-94P-201ENST00000607728 107 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 U6.73-201ENST00000619194 103 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 AL035470.1-201ENST00000622571 220 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF144AP50876 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF144AP50876 AC009487.4-201ENST00000624969 3585 ntBASIC3.78□□□□□ -1.8
RNF144AP50876 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF144AP50876 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RNF144AP50876 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF144AP50876 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF144AP50876 Y_RNA.323-201ENST00000365157 109 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 RNU6-1235P-201ENST00000384559 107 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 RNU6-498P-201ENST00000459468 107 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 RN7SL385P-201ENST00000468873 276 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 AC093663.1-201ENST00000497190 394 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 AC097462.1-201ENST00000514125 324 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 AC099522.1-202ENST00000514718 367 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
RNF144AP50876 MIR6810-201ENST00000622701 70 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RNF144AP50876 MIR6830-201ENST00000636015 70 ntBASIC3.77□□□□□ -1.81
RNF144AP50876 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.77□□□□□ -1.81
RNF144AP50876 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF144AP50876 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
RNF144AP50876 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RNF144AP50876 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF144AP50876 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF144AP50876 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RNF144AP50876 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF144AP50876 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF144AP50876 RNA5SP130-201ENST00000364431 114 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 RNU6-438P-201ENST00000365561 103 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 MIR488-201ENST00000365739 83 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 Y_RNA.621-201ENST00000411065 96 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 RNU2-32P-201ENST00000411193 191 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 AC016909.1-201ENST00000415916 166 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 DBIP2-201ENST00000419076 262 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 AL162151.2-201ENST00000448875 158 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 RNU6-638P-201ENST00000516582 104 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 RNU7-143P-201ENST00000516781 65 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 RNU6-1149P-201ENST00000516810 97 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 MRPL49P2-201ENST00000521066 465 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF144AP50876 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.76□□□□□ -1.81
RNF144AP50876 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF144AP50876 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF144AP50876 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
RNF144AP50876 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RNF144AP50876 Y_RNA.220-201ENST00000364244 109 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 SNORD61-201ENST00000384252 73 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
RNF144AP50876 RPL21P129-201ENST00000491732 478 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 RPL29P14-201ENST00000495837 428 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 AC011406.1-201ENST00000512440 370 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 RNU6-1270P-201ENST00000517128 108 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 AC025627.2-201ENST00000576220 160 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 AC103810.1-201ENST00000579873 453 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 MIR4697-201ENST00000582977 78 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 MIR5684-201ENST00000585074 65 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 AL442128.1-201ENST00000615151 90 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF144AP50876 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
RNF144AP50876 MAPK10-373ENST00000641983 6772 ntBASIC3.75□□□□□ -1.81
RNF144AP50876 AL049781.1-201ENST00000623195 3585 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms