Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RAB28P5-201ENST00000427490 651 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RPL39P29-201ENST00000447779 157 ntBASIC2.82□□□□□ -1.96
CLK3P49761 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK3P49761 RPL27AP5-201ENST00000469428 449 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RN7SL504P-201ENST00000494496 287 ntBASIC2.82□□□□□ -1.96
CLK3P49761 AC005840.1-201ENST00000498412 377 ntBASIC2.82□□□□□ -1.96
CLK3P49761 SEM1P1-201ENST00000506694 209 ntBASIC2.82□□□□□ -1.96
CLK3P49761 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK3P49761 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.82□□□□□ -1.96
CLK3P49761 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.82□□□□□ -1.96
CLK3P49761 AL356575.1-201ENST00000603008 283 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RNU6-91P-201ENST00000607774 107 ntBASIC2.82□□□□□ -1.96
CLK3P49761 uc_338.14-201ENST00000613162 166 ntBASIC2.82□□□□□ -1.96
CLK3P49761 AC004467.1-201ENST00000615678 330 ntBASIC2.82□□□□□ -1.96
CLK3P49761 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK3P49761 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLK3P49761 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.82□□□□□ -1.96
CLK3P49761 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLK3P49761 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.81□□□□□ -1.96
CLK3P49761 Y_RNA.7-201ENST00000362352 102 ntBASIC2.81□□□□□ -1.96
CLK3P49761 Y_RNA.23-201ENST00000362496 106 ntBASIC2.81□□□□□ -1.96
CLK3P49761 Y_RNA.121-201ENST00000363309 113 ntBASIC2.81□□□□□ -1.96
CLK3P49761 RNU6-487P-201ENST00000365430 104 ntBASIC2.81□□□□□ -1.96
CLK3P49761 SNORD21-201ENST00000383953 95 ntBASIC2.81□□□□□ -1.96
CLK3P49761 RNU6-793P-201ENST00000384233 104 ntBASIC2.81□□□□□ -1.96
CLK3P49761 Y_RNA.568-201ENST00000384742 113 ntBASIC2.81□□□□□ -1.96
CLK3P49761 RNU6-1199P-201ENST00000411249 104 ntBASIC2.81□□□□□ -1.96
CLK3P49761 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
CLK3P49761 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.81□□□□□ -1.96
CLK3P49761 RPL30P12-201ENST00000474666 353 ntBASIC2.81□□□□□ -1.96
CLK3P49761 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
CLK3P49761 AC140059.1-201ENST00000489238 361 ntBASIC2.81□□□□□ -1.96
CLK3P49761 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.81□□□□□ -1.96
CLK3P49761 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.81□□□□□ -1.96
CLK3P49761 RNU6-313P-201ENST00000516317 112 ntBASIC2.81□□□□□ -1.96
CLK3P49761 SNORA70.24-201ENST00000517233 118 ntBASIC2.81□□□□□ -1.96
CLK3P49761 SUMO2P18-201ENST00000518873 252 ntBASIC2.81□□□□□ -1.96
CLK3P49761 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLK3P49761 YPEL5P2-201ENST00000605553 359 ntBASIC2.81□□□□□ -1.96
CLK3P49761 AL008718.3-201ENST00000610217 321 ntBASIC2.81□□□□□ -1.96
CLK3P49761 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLK3P49761 AC000403.1-201ENST00000613696 3585 ntBASIC2.8□□□□□ -1.96
CLK3P49761 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
CLK3P49761 Y_RNA.75-201ENST00000362927 97 ntBASIC2.8□□□□□ -1.96
CLK3P49761 RNU6-1290P-201ENST00000362957 109 ntBASIC2.8□□□□□ -1.96
CLK3P49761 Y_RNA.238-201ENST00000364441 102 ntBASIC2.8□□□□□ -1.96
CLK3P49761 RNU6-1083P-201ENST00000384022 107 ntBASIC2.8□□□□□ -1.96
CLK3P49761 RNU6-622P-201ENST00000384272 103 ntBASIC2.8□□□□□ -1.96
CLK3P49761 Y_RNA.488-201ENST00000384403 102 ntBASIC2.8□□□□□ -1.96
CLK3P49761 RNU6-417P-201ENST00000384712 107 ntBASIC2.8□□□□□ -1.96
CLK3P49761 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
CLK3P49761 RNU6-131P-201ENST00000391144 107 ntBASIC2.8□□□□□ -1.96
CLK3P49761 U3.26-201ENST00000391236 204 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
CLK3P49761 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
CLK3P49761 ELOCP21-201ENST00000412558 336 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AL162725.1-201ENST00000435405 301 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.8□□□□□ -1.96
CLK3P49761 SCARNA17.1-201ENST00000516211 143 ntBASIC2.8□□□□□ -1.96
CLK3P49761 SCARNA17.2-201ENST00000516334 143 ntBASIC2.8□□□□□ -1.96
CLK3P49761 RNU6-155P-201ENST00000516347 100 ntBASIC2.8□□□□□ -1.96
CLK3P49761 MIR3145-201ENST00000580727 82 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AC090897.2-201ENST00000581715 130 ntBASIC2.8□□□□□ -1.96
CLK3P49761 SCARNA17.4-201ENST00000614296 143 ntBASIC2.8□□□□□ -1.96
CLK3P49761 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AC091932.3-201ENST00000624223 323 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AC091895.1-201ENST00000624494 256 ntBASIC2.8□□□□□ -1.96
CLK3P49761 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.8□□□□□ -1.96
CLK3P49761 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.8□□□□□ -1.96
CLK3P49761 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.8□□□□□ -1.96
CLK3P49761 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLK3P49761 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLK3P49761 Y_RNA.81-201ENST00000362997 102 ntBASIC2.79□□□□□ -1.96
CLK3P49761 RNU4-84P-201ENST00000364200 139 ntBASIC2.79□□□□□ -1.96
CLK3P49761 RNU6-1154P-201ENST00000391001 104 ntBASIC2.79□□□□□ -1.96
CLK3P49761 RNU2-54P-201ENST00000410299 190 ntBASIC2.79□□□□□ -1.96
CLK3P49761 BTF3P11-201ENST00000426582 477 ntBASIC2.79□□□□□ -1.96
CLK3P49761 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.79□□□□□ -1.96
CLK3P49761 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK3P49761 IFNA11P-201ENST00000446352 526 ntBASIC2.79□□□□□ -1.96
CLK3P49761 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK3P49761 AC091179.3-201ENST00000474761 144 ntBASIC2.79□□□□□ -1.96
CLK3P49761 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
CLK3P49761 AC006445.1-201ENST00000491925 405 ntBASIC2.79□□□□□ -1.96
CLK3P49761 SCARNA11.3-201ENST00000517276 130 ntBASIC2.79□□□□□ -1.96
CLK3P49761 AC115990.1-201ENST00000526957 301 ntBASIC2.79□□□□□ -1.96
CLK3P49761 AC074050.1-201ENST00000563247 211 ntBASIC2.79□□□□□ -1.96
CLK3P49761 AC012493.2-201ENST00000595083 291 ntBASIC2.79□□□□□ -1.96
CLK3P49761 DEFB117-201ENST00000602356 141 ntBASIC2.79□□□□□ -1.96
CLK3P49761 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK3P49761 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
CLK3P49761 MIR3651-201ENST00000630427 90 ntBASIC2.79□□□□□ -1.96
CLK3P49761 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
CLK3P49761 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLK3P49761 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.79□□□□□ -1.96
CLK3P49761 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.78□□□□□ -1.96
CLK3P49761 RNU1-62P-201ENST00000362599 164 ntBASIC2.78□□□□□ -1.96
CLK3P49761 Y_RNA.357-201ENST00000365487 109 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms