Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A11P48066 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A11P48066 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A11P48066 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC6A11P48066 U3.8-201ENST00000363675 217 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 SNORA5B-201ENST00000363786 132 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 RNY1P5-201ENST00000383890 115 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 RNU6-394P-201ENST00000410735 107 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 RNU6-1135P-201ENST00000411083 103 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 AL606753.1-201ENST00000427435 87 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A11P48066 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A11P48066 MIR7153-201ENST00000637758 57 ntBASIC3.14□□□□□ -1.91
SLC6A11P48066 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A11P48066 AC134026.1-201ENST00000623249 2239 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A11P48066 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A11P48066 AC000403.1-201ENST00000613696 3585 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A11P48066 Y_RNA.182-201ENST00000363880 111 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 Y_RNA.238-201ENST00000364441 102 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 RNA5SP240-201ENST00000365355 128 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 SNORD116-18-201ENST00000383961 92 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 MIR548B-201ENST00000385247 97 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 RNU6-855P-201ENST00000410395 104 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 RNU5E-9P-201ENST00000411164 104 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 AL135790.2-201ENST00000437701 267 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC6A11P48066 RPS20P10-201ENST00000451209 253 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 SRIP1-201ENST00000489235 288 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 RNA5SP112-201ENST00000515937 99 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 MIR449C-201ENST00000516047 92 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC6A11P48066 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 AC004832.4-201ENST00000608952 331 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 UCA1.1-201ENST00000620952 75 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 AC008873.1-201ENST00000625051 138 ntBASIC3.13□□□□□ -1.91
SLC6A11P48066 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC6A11P48066 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A11P48066 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A11P48066 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC6A11P48066 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC6A11P48066 AC010329.5-201ENST00000623497 2174 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A11P48066 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC6A11P48066 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A11P48066 RNU6-1048P-201ENST00000364054 107 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 RNU6-801P-201ENST00000364087 105 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 Y_RNA.287-201ENST00000364853 94 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 Y_RNA.293-201ENST00000364908 93 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 SNORA67.2-201ENST00000384300 149 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 MIR29B2-201ENST00000385055 81 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 SNORA26.5-201ENST00000391215 123 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 RNU6-710P-201ENST00000410424 105 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A11P48066 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A11P48066 RNU6-1098P-201ENST00000516772 96 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 SUMO2P18-201ENST00000518873 252 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 AC136628.3-201ENST00000521868 290 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC6A11P48066 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC6A11P48066 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC6A11P48066 U6.115-201ENST00000636045 103 ntBASIC3.12□□□□□ -1.91
SLC6A11P48066 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC6A11P48066 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A11P48066 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC6A11P48066 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A11P48066 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC6A11P48066 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A11P48066 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A11P48066 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SLC6A11P48066 Y_RNA.243-201ENST00000364481 109 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 MIR613-201ENST00000385248 95 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A11P48066 AL451074.5-201ENST00000415894 435 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A11P48066 AL139132.1-201ENST00000431587 344 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC6A11P48066 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
SLC6A11P48066 SCARNA17.1-201ENST00000516211 143 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 SCARNA17.2-201ENST00000516334 143 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 AC100767.1-201ENST00000528178 123 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 AC108706.1-201ENST00000611053 297 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 SCARNA17.4-201ENST00000614296 143 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 AC110079.1-202ENST00000635213 138 ntBASIC3.11□□□□□ -1.91
SLC6A11P48066 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SLC6A11P48066 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SLC6A11P48066 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC6A11P48066 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A11P48066 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SLC6A11P48066 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SLC6A11P48066 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms