Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.91□□□□□ -2.26
RFC3P40938 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.91□□□□□ -2.26
RFC3P40938 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
RFC3P40938 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
RFC3P40938 SNORA31.10-201ENST00000516482 106 ntBASIC0.91□□□□□ -2.26
RFC3P40938 RNU1-142P-201ENST00000516682 145 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AC025647.1-201ENST00000517879 253 ntBASIC0.91□□□□□ -2.26
RFC3P40938 SUMO2P16-201ENST00000519475 264 ntBASIC0.91□□□□□ -2.26
RFC3P40938 CYCSP23-201ENST00000519781 313 ntBASIC0.91□□□□□ -2.26
RFC3P40938 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.91□□□□□ -2.26
RFC3P40938 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RFC3P40938 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.91□□□□□ -2.26
RFC3P40938 AL137100.2-201ENST00000555786 315 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AL118558.2-201ENST00000556294 238 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.91□□□□□ -2.26
RFC3P40938 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.91□□□□□ -2.26
RFC3P40938 AC146944.4-201ENST00000602697 718 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AL022345.2-201ENST00000606307 135 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AC097065.2-201ENST00000608159 533 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AC007684.1-201ENST00000609671 477 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AC073114.1-201ENST00000612027 490 ntBASIC0.91□□□□□ -2.26
RFC3P40938 AC068647.2-201ENST00000637380 353 ntBASIC0.91□□□□□ -2.26
RFC3P40938 U6.108-201ENST00000637764 58 ntBASIC0.91□□□□□ -2.26
RFC3P40938 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
RFC3P40938 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.9□□□□□ -2.26
RFC3P40938 Y_RNA.1-201ENST00000352915 104 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNU6-1240P-201ENST00000365155 104 ntBASIC0.9□□□□□ -2.27
RFC3P40938 Y_RNA.378-201ENST00000365652 113 ntBASIC0.9□□□□□ -2.27
RFC3P40938 Y_RNA.381-201ENST00000365666 102 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNU6-38P-201ENST00000384085 107 ntBASIC0.9□□□□□ -2.27
RFC3P40938 SNORA75-201ENST00000384158 137 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNU6-42P-201ENST00000384165 107 ntBASIC0.9□□□□□ -2.27
RFC3P40938 MIR489-201ENST00000384923 84 ntBASIC0.9□□□□□ -2.27
RFC3P40938 SNORD37.1-201ENST00000390968 65 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RN7SKP200-201ENST00000410564 320 ntBASIC0.9□□□□□ -2.27
RFC3P40938 AL663109.1-201ENST00000411498 844 ntBASIC0.9□□□□□ -2.27
RFC3P40938 AC010154.1-201ENST00000425857 269 ntBASIC0.9□□□□□ -2.27
RFC3P40938 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.9□□□□□ -2.27
RFC3P40938 Y_RNA.654-201ENST00000497848 106 ntBASIC0.9□□□□□ -2.27
RFC3P40938 AC092436.3-201ENST00000511788 257 ntBASIC0.9□□□□□ -2.27
RFC3P40938 SNORA19.2-201ENST00000516013 114 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNA5SP220-201ENST00000516298 104 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNU6-1038P-201ENST00000516516 104 ntBASIC0.9□□□□□ -2.27
RFC3P40938 Y_RNA.695-201ENST00000516715 107 ntBASIC0.9□□□□□ -2.27
RFC3P40938 Y_RNA.717-201ENST00000517106 92 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RNU6-165P-201ENST00000517170 99 ntBASIC0.9□□□□□ -2.27
RFC3P40938 MTND1P35-201ENST00000526739 508 ntBASIC0.9□□□□□ -2.27
RFC3P40938 AL359075.3-201ENST00000613288 217 ntBASIC0.9□□□□□ -2.27
RFC3P40938 RMST_2.1-201ENST00000617263 136 ntBASIC0.9□□□□□ -2.27
RFC3P40938 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.9□□□□□ -2.27
RFC3P40938 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RFC3P40938 RNU6-214P-201ENST00000384130 107 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AC092447.3-201ENST00000426027 686 ntBASIC0.89□□□□□ -2.27
RFC3P40938 TIMM9P3-201ENST00000428659 274 ntBASIC0.89□□□□□ -2.27
RFC3P40938 snoU13.18-201ENST00000459483 104 ntBASIC0.89□□□□□ -2.27
RFC3P40938 RPS3AP17-201ENST00000472594 777 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
RFC3P40938 AC091885.1-201ENST00000506658 268 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
RFC3P40938 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.89□□□□□ -2.27
RFC3P40938 AC100830.2-201ENST00000581636 240 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AL390123.1-201ENST00000603216 237 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AC022217.4-201ENST00000604389 163 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AC004492.1-201ENST00000607036 742 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AL121757.2-201ENST00000611223 313 ntBASIC0.89□□□□□ -2.27
RFC3P40938 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.89□□□□□ -2.27
RFC3P40938 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.89□□□□□ -2.27
RFC3P40938 ZNF204P-201ENST00000416749 2397 ntBASIC0.88□□□□□ -2.27
RFC3P40938 Y_RNA.296-201ENST00000364930 108 ntBASIC0.88□□□□□ -2.27
RFC3P40938 RNU4-66P-201ENST00000365199 138 ntBASIC0.88□□□□□ -2.27
RFC3P40938 RNU6-245P-201ENST00000384020 107 ntBASIC0.88□□□□□ -2.27
RFC3P40938 MIR521-1-201ENST00000384902 87 ntBASIC0.88□□□□□ -2.27
RFC3P40938 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RFC3P40938 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.88□□□□□ -2.27
RFC3P40938 RPL23AP75-201ENST00000491601 451 ntBASIC0.88□□□□□ -2.27
RFC3P40938 MTCO1P29-201ENST00000496868 288 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.88□□□□□ -2.27
RFC3P40938 RNA5SP401-201ENST00000515920 127 ntBASIC0.88□□□□□ -2.27
RFC3P40938 RNA5SP54-201ENST00000516951 92 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
RFC3P40938 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.88□□□□□ -2.27
RFC3P40938 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.88□□□□□ -2.27
RFC3P40938 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
RFC3P40938 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AC017083.3-201ENST00000609955 700 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AL158063.1-201ENST00000615349 536 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AC012676.2-201ENST00000619258 186 ntBASIC0.88□□□□□ -2.27
RFC3P40938 MIR8054-201ENST00000620877 86 ntBASIC0.88□□□□□ -2.27
RFC3P40938 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
RFC3P40938 MIR450B-201ENST00000401182 78 ntBASIC0.87□□□□□ -2.27
RFC3P40938 RNA5SP504-201ENST00000410676 117 ntBASIC0.87□□□□□ -2.27
RFC3P40938 MRPS10P2-201ENST00000431226 381 ntBASIC0.87□□□□□ -2.27
RFC3P40938 MTCO2P16-201ENST00000436962 677 ntBASIC0.87□□□□□ -2.27
RFC3P40938 RNU6-1208P-201ENST00000459588 107 ntBASIC0.87□□□□□ -2.27
RFC3P40938 SRRM1P2-201ENST00000464531 1192 ntBASIC0.87□□□□□ -2.27
RFC3P40938 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
RFC3P40938 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.87□□□□□ -2.27
RFC3P40938 MTND1P5-201ENST00000517906 940 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms