Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 MTCO3P8-201ENST00000453691 755 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.19□□□□□ -2.44
SDC4P31431 MTND1P12-201ENST00000455231 147 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 RN7SKP164-201ENST00000516138 266 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.19□□□□□ -2.44
SDC4P31431 AC087894.1-201ENST00000538359 518 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 AC015726.2-201ENST00000620112 122 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 AC019226.2-201ENST00000625973 424 ntBASIC-0.19□□□□□ -2.44
SDC4P31431 RNU4-1-201ENST00000363925 141 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 SNORD116.1-201ENST00000365628 92 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 MTCYBP36-201ENST00000404146 440 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 RNA5SP95-201ENST00000410319 137 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 RNU7-94P-201ENST00000459576 63 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 RNU7-41P-201ENST00000515917 61 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 RNA5SP480-201ENST00000516840 109 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.2□□□□□ -2.44
SDC4P31431 MTATP6P25-201ENST00000574491 261 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 MIR3612-201ENST00000579753 87 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 AC121334.2-201ENST00000605387 271 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 AC013244.3-201ENST00000605614 388 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 AL512506.1-201ENST00000613918 449 ntBASIC-0.2□□□□□ -2.44
SDC4P31431 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.2□□□□□ -2.44
SDC4P31431 MIRLET7C-201ENST00000362160 84 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 RNU6-413P-201ENST00000384115 107 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 SNORA67.2-201ENST00000384300 149 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 SNORD111-201ENST00000408139 94 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 SNORA40.8-201ENST00000411034 126 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.21□□□□□ -2.44
SDC4P31431 AC004854.1-201ENST00000440356 349 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.21□□□□□ -2.44
SDC4P31431 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.21□□□□□ -2.44
SDC4P31431 HMGN2P26-201ENST00000463169 339 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 RNU6-685P-201ENST00000517088 95 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 AP001836.1-201ENST00000604675 523 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 AL121895.2-201ENST00000619558 447 ntBASIC-0.21□□□□□ -2.44
SDC4P31431 MIR1-1-201ENST00000362147 71 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 RNU6-827P-201ENST00000365553 106 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 RNU6-116P-201ENST00000384042 109 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 RNU6-700P-201ENST00000391043 107 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 ERHP2-201ENST00000402323 299 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 RNU2-8P-201ENST00000410727 190 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 AL031274.1-201ENST00000450334 232 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.22□□□□□ -2.44
SDC4P31431 AC104136.1-201ENST00000512969 394 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 AC074133.1-201ENST00000515696 183 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 RNU7-99P-201ENST00000516271 62 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.22□□□□□ -2.44
SDC4P31431 AC026470.2-201ENST00000561492 181 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 FRG2DP-202ENST00000566967 323 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 AC010620.1-201ENST00000601088 1102 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 U6.73-201ENST00000619194 103 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 AL008636.1-201ENST00000625038 1018 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 snoZ196.1-201ENST00000625269 89 ntBASIC-0.22□□□□□ -2.44
SDC4P31431 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.22□□□□□ -2.44
SDC4P31431 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.45
SDC4P31431 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 RNU6-641P-201ENST00000384006 107 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 MIR586-201ENST00000385035 97 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 RNU2-39P-201ENST00000410604 198 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 AC008134.1-201ENST00000420943 193 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.23□□□□□ -2.45
SDC4P31431 AL353997.1-201ENST00000432936 108 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 SEPT7P4-201ENST00000437076 306 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 AC009237.7-201ENST00000447357 229 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 AC007327.1-201ENST00000447461 264 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.23□□□□□ -2.45
SDC4P31431 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.23□□□□□ -2.45
SDC4P31431 AC027288.2-201ENST00000553028 243 ntBASIC-0.23□□□□□ -2.45
SDC4P31431 RNU6-137P-201ENST00000363680 108 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 SNORD113.3-201ENST00000364630 78 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 SNORD116-12-201ENST00000384468 92 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 MIR520G-201ENST00000385064 90 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 MIR520H-201ENST00000385126 88 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 SNORD71-201ENST00000411292 86 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 MTND1P20-201ENST00000430341 950 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.24□□□□□ -2.45
SDC4P31431 RNU6-221P-201ENST00000459541 99 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.24□□□□□ -2.45
SDC4P31431 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.24□□□□□ -2.45
SDC4P31431 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 MIR2909-201ENST00000617113 69 ntBASIC-0.24□□□□□ -2.45
SDC4P31431 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.25□□□□□ -2.45
SDC4P31431 MIR558-201ENST00000384920 94 ntBASIC-0.25□□□□□ -2.45
SDC4P31431 RNA5SP496-201ENST00000391240 109 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms