Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-546P-201ENST00000383991 107 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 RNU6-975P-201ENST00000384296 105 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 SNORA48.5-201ENST00000391143 135 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 RNU6-855P-201ENST00000410395 104 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 RNU2-32P-201ENST00000411193 191 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 RNU6-57P-201ENST00000411348 103 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 AC016717.1-201ENST00000448918 286 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 AC080013.2-201ENST00000460866 323 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC12P31275 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC12P31275 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC12P31275 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC12P31275 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC12P31275 MIR4308-201ENST00000580634 81 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC12P31275 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 snoZ196.1-201ENST00000625269 89 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 MIR1248-201ENST00000629190 106 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 AC244205.2-202ENST00000635781 342 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 Z82209.1-201ENST00000422141 2135 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC12P31275 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXC12P31275 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXC12P31275 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HOXC12P31275 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC12P31275 RNU6-653P-201ENST00000363074 106 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 RNU6-743P-201ENST00000364151 106 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 Y_RNA.341-201ENST00000365341 102 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 RN7SKP51-201ENST00000410781 304 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 AL135790.2-201ENST00000437701 267 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 CYP2C59P-201ENST00000457790 269 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 RPL23AP67-201ENST00000465341 474 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 AC074198.2-201ENST00000508153 258 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 Y_RNA.662-201ENST00000516028 97 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 SNORA70.12-201ENST00000516084 153 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC12P31275 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC12P31275 MIR3684-201ENST00000579779 74 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 U4.6-201ENST00000621618 127 ntBASIC3.1□□□□□ -1.91
HOXC12P31275 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC12P31275 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HOXC12P31275 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
HOXC12P31275 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC12P31275 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC12P31275 AC134026.1-201ENST00000623249 2239 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC12P31275 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC12P31275 Y_RNA.287-201ENST00000364853 94 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 RNU6-1180P-201ENST00000364935 107 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 RNU6-418P-201ENST00000384035 107 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 Y_RNA.464-201ENST00000384282 110 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 SNORA26.5-201ENST00000391215 123 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 U3.39-201ENST00000408569 239 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 DBIP2-201ENST00000419076 262 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 HMGN2P18-201ENST00000450680 270 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 RN7SL594P-201ENST00000470590 287 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 RNU6-948P-201ENST00000516374 107 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC12P31275 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC12P31275 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC12P31275 MIR5692C2-201ENST00000577959 77 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
HOXC12P31275 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC12P31275 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC12P31275 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXC12P31275 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXC12P31275 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HOXC12P31275 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC12P31275 RNU1-18P-201ENST00000363062 164 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 RNU6-1048P-201ENST00000364054 107 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 RNA5SP240-201ENST00000365355 128 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 Y_RNA.510-201ENST00000384511 114 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 MTCO2P33-201ENST00000402100 465 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 RNA5SP492-201ENST00000411330 114 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC12P31275 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 RNU6-221P-201ENST00000459541 99 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 RN7SL93P-201ENST00000463035 293 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 UBE2DNL-203ENST00000474922 222 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC12P31275 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC12P31275 SNORA70.18-201ENST00000516696 98 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC12P31275 AC022616.8-201ENST00000533569 253 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 AL078604.3-201ENST00000615580 211 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 MFSD8-233ENST00000641482 4860 ntBASIC3.08□□□□□ -1.92
HOXC12P31275 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC12P31275 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
HOXC12P31275 Y_RNA.361-201ENST00000365515 120 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 Y_RNA.368-201ENST00000365547 113 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 SNORA20B-201ENST00000384220 132 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 Y_RNA.456-201ENST00000384232 111 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AL355796.1-201ENST00000406706 323 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AL357139.1-201ENST00000407792 426 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 RN7SKP111-201ENST00000410349 271 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 RNU4-61P-201ENST00000411243 107 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AL121890.1-201ENST00000435457 205 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms