Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SNRPGP17-201ENST00000603780 214 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AC084781.2-201ENST00000615568 161 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AC005562.2-201ENST00000618264 111 ntBASIC1.63□□□□□ -2.15
GDF1P27539 AL353997.5-201ENST00000618886 171 ntBASIC1.63□□□□□ -2.15
GDF1P27539 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
GDF1P27539 ZNF204P-201ENST00000416749 2397 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RNU6-222P-201ENST00000362438 107 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RNU4-79P-201ENST00000362764 141 ntBASIC1.62□□□□□ -2.15
GDF1P27539 Y_RNA.259-201ENST00000364619 101 ntBASIC1.62□□□□□ -2.15
GDF1P27539 Y_RNA.332-201ENST00000365271 113 ntBASIC1.62□□□□□ -2.15
GDF1P27539 MIR559-201ENST00000385188 96 ntBASIC1.62□□□□□ -2.15
GDF1P27539 MT-TD-201ENST00000387419 68 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RNU6-159P-201ENST00000391080 106 ntBASIC1.62□□□□□ -2.15
GDF1P27539 MIR190B-201ENST00000401119 79 ntBASIC1.62□□□□□ -2.15
GDF1P27539 SRIP3-201ENST00000413200 219 ntBASIC1.62□□□□□ -2.15
GDF1P27539 MTND3P23-201ENST00000431980 347 ntBASIC1.62□□□□□ -2.15
GDF1P27539 AL445305.1-201ENST00000432577 575 ntBASIC1.62□□□□□ -2.15
GDF1P27539 AL137159.1-201ENST00000452808 512 ntBASIC1.62□□□□□ -2.15
GDF1P27539 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.62□□□□□ -2.15
GDF1P27539 RPL17P19-201ENST00000489069 552 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RN7SL274P-201ENST00000492268 272 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
GDF1P27539 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
GDF1P27539 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RNA5SP490-201ENST00000517141 136 ntBASIC1.62□□□□□ -2.15
GDF1P27539 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.62□□□□□ -2.15
GDF1P27539 AC026470.2-201ENST00000561492 181 ntBASIC1.62□□□□□ -2.15
GDF1P27539 RPL17P51-201ENST00000605218 238 ntBASIC1.62□□□□□ -2.15
GDF1P27539 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
GDF1P27539 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.62□□□□□ -2.15
GDF1P27539 AL359314.1-201ENST00000616913 261 ntBASIC1.62□□□□□ -2.15
GDF1P27539 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
GDF1P27539 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
GDF1P27539 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.61□□□□□ -2.15
GDF1P27539 Y_RNA.106-201ENST00000363189 100 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNU6-137P-201ENST00000363680 108 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNA5SP99-201ENST00000364020 114 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNU6-1164P-201ENST00000364428 107 ntBASIC1.61□□□□□ -2.15
GDF1P27539 MIR10B-201ENST00000385011 110 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNU6-482P-201ENST00000391068 107 ntBASIC1.61□□□□□ -2.15
GDF1P27539 HMGN2P39-201ENST00000398005 273 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNA5SP504-201ENST00000410676 117 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
GDF1P27539 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.61□□□□□ -2.15
GDF1P27539 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.61□□□□□ -2.15
GDF1P27539 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.61□□□□□ -2.15
GDF1P27539 AC016925.1-201ENST00000458303 298 ntBASIC1.61□□□□□ -2.15
GDF1P27539 U8.22-201ENST00000459141 133 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNU7-14P-201ENST00000459331 62 ntBASIC1.61□□□□□ -2.15
GDF1P27539 AC022493.2-201ENST00000506122 481 ntBASIC1.61□□□□□ -2.15
GDF1P27539 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.61□□□□□ -2.15
GDF1P27539 RNU6-470P-201ENST00000515954 104 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNU5F-4P-201ENST00000516581 114 ntBASIC1.61□□□□□ -2.15
GDF1P27539 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.61□□□□□ -2.15
GDF1P27539 AL031274.2-201ENST00000599419 203 ntBASIC1.61□□□□□ -2.15
GDF1P27539 TCL6_2.1-201ENST00000615162 119 ntBASIC1.61□□□□□ -2.15
GDF1P27539 RNU6-545P-201ENST00000362681 104 ntBASIC1.6□□□□□ -2.15
GDF1P27539 RNU6-873P-201ENST00000363833 107 ntBASIC1.6□□□□□ -2.15
GDF1P27539 SNORD114-6-201ENST00000364393 72 ntBASIC1.6□□□□□ -2.15
GDF1P27539 RNU6-99P-201ENST00000364721 107 ntBASIC1.6□□□□□ -2.15
GDF1P27539 SNORD31B-201ENST00000364977 69 ntBASIC1.6□□□□□ -2.15
GDF1P27539 SNORA67.2-201ENST00000384300 149 ntBASIC1.6□□□□□ -2.15
GDF1P27539 SNORD14D-201ENST00000384390 87 ntBASIC1.6□□□□□ -2.15
GDF1P27539 RNU1-139P-201ENST00000391307 165 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AL357139.1-201ENST00000407792 426 ntBASIC1.6□□□□□ -2.15
GDF1P27539 MIR1283-2-201ENST00000408621 87 ntBASIC1.6□□□□□ -2.15
GDF1P27539 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
GDF1P27539 MTCYBP10-201ENST00000424905 650 ntBASIC1.6□□□□□ -2.15
GDF1P27539 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.6□□□□□ -2.15
GDF1P27539 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.6□□□□□ -2.15
GDF1P27539 RPL23AP6-201ENST00000446637 472 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AC009237.7-201ENST00000447357 229 ntBASIC1.6□□□□□ -2.15
GDF1P27539 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.6□□□□□ -2.15
GDF1P27539 RPS23P5-201ENST00000495419 428 ntBASIC1.6□□□□□ -2.15
GDF1P27539 RNU6-307P-201ENST00000516743 106 ntBASIC1.6□□□□□ -2.15
GDF1P27539 RNA5SP54-201ENST00000516951 92 ntBASIC1.6□□□□□ -2.15
GDF1P27539 SUB1P3-201ENST00000564581 315 ntBASIC1.6□□□□□ -2.15
GDF1P27539 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AC100812.1-201ENST00000607622 580 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.6□□□□□ -2.15
GDF1P27539 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.6□□□□□ -2.15
GDF1P27539 MIR1244-1-201ENST00000612829 85 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AC104985.2-201ENST00000620598 500 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.6□□□□□ -2.15
GDF1P27539 MIR1244-3-201ENST00000635744 85 ntBASIC1.6□□□□□ -2.15
GDF1P27539 MIR1244-2-201ENST00000636449 85 ntBASIC1.6□□□□□ -2.15
GDF1P27539 MIR1244-4-202ENST00000636813 85 ntBASIC1.6□□□□□ -2.15
GDF1P27539 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.6□□□□□ -2.15
GDF1P27539 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
GDF1P27539 MTND5P16-201ENST00000460269 1703 ntBASIC1.6□□□□□ -2.15
GDF1P27539 Y_RNA.99-201ENST00000363138 105 ntBASIC1.59□□□□□ -2.15
GDF1P27539 MIR518A2-201ENST00000384966 87 ntBASIC1.59□□□□□ -2.15
GDF1P27539 RNU6-700P-201ENST00000391043 107 ntBASIC1.59□□□□□ -2.15
GDF1P27539 AL627390.1-201ENST00000396055 340 ntBASIC1.59□□□□□ -2.15
GDF1P27539 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
GDF1P27539 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.59□□□□□ -2.15
GDF1P27539 RPL23AP50-201ENST00000434149 455 ntBASIC1.59□□□□□ -2.15
GDF1P27539 RNU6-237P-201ENST00000515985 71 ntBASIC1.59□□□□□ -2.15
GDF1P27539 Y_RNA.675-201ENST00000516389 149 ntBASIC1.59□□□□□ -2.15
GDF1P27539 Y_RNA.706-201ENST00000516933 99 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms