Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2AP24928 AC103975.1-201ENST00000482506 483 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 RPS27AP10-201ENST00000496103 208 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 RNA5SP380-201ENST00000517190 98 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AC004832.4-201ENST00000608952 331 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AL357075.2-201ENST00000614906 189 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AL078604.3-201ENST00000615580 211 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 SNORA43.4-201ENST00000629559 138 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
POLR2AP24928 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2AP24928 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2AP24928 AP006437.1-201ENST00000641440 3685 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2AP24928 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2AP24928 Y_RNA.398-201ENST00000383952 99 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 Y_RNA.435-201ENST00000384095 112 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 RNU6-1035P-201ENST00000384477 107 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 MIR767-201ENST00000390228 109 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
POLR2AP24928 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
POLR2AP24928 SNORA40.19-201ENST00000390846 128 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 RNU6-1001P-201ENST00000411265 100 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AL451074.5-201ENST00000415894 435 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 BTF3P11-201ENST00000426582 477 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 snoU13.28-201ENST00000459235 104 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 RNU6-436P-201ENST00000516171 114 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AP004242.1-201ENST00000533701 349 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR2AP24928 MIR5695-201ENST00000579717 85 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 MIR548AI-201ENST00000579940 88 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AC013791.1-201ENST00000616619 62 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 AC099654.7-201ENST00000635788 2127 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 BX322639.1-202ENST00000423987 2213 ntBASIC2.83□□□□□ -1.96
POLR2AP24928 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
POLR2AP24928 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR2AP24928 AL157777.2-201ENST00000258070 137 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 SNORA72.2-201ENST00000365028 127 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 RNU6-968P-201ENST00000384076 107 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 RNU6-20P-201ENST00000384106 107 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 RPL23AP70-201ENST00000483361 460 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 AC090616.3-201ENST00000582184 217 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 AC012531.5-201ENST00000611375 151 ntBASIC2.82□□□□□ -1.96
POLR2AP24928 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR2AP24928 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR2AP24928 Y_RNA.7-201ENST00000362352 102 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RNU6-884P-201ENST00000363889 107 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 Y_RNA.368-201ENST00000365547 113 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RNU6-1168P-201ENST00000390831 104 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AL357139.1-201ENST00000407792 426 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RNA5SP201-201ENST00000410316 124 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR2AP24928 AC009237.7-201ENST00000447357 229 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.81□□□□□ -1.96
POLR2AP24928 RNU6-625P-201ENST00000459412 107 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RNA5SP281-201ENST00000516504 135 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RNU6-1231P-201ENST00000517185 103 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AC021739.1-201ENST00000559631 174 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 MIR3186-201ENST00000577404 85 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
POLR2AP24928 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
POLR2AP24928 RNU6-1210P-201ENST00000363775 107 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RNU1-100P-201ENST00000365255 165 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 RAB28P5-201ENST00000427490 651 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AC005002.2-201ENST00000438228 269 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
POLR2AP24928 RPL23AP3-201ENST00000453844 468 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 HMGB3P3-201ENST00000510526 400 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR2AP24928 RNU6-1073P-201ENST00000517182 106 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AC018448.1-201ENST00000552843 316 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 MIR5092-201ENST00000583139 88 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 SNRPGP20-201ENST00000604477 205 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.81□□□□□ -1.96
POLR2AP24928 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.81□□□□□ -1.96
POLR2AP24928 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
POLR2AP24928 AC091564.4-201ENST00000533934 2194 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
POLR2AP24928 AC008264.2-201ENST00000610193 3731 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 Y_RNA.23-201ENST00000362496 106 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-1266P-201ENST00000362794 105 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-454P-201ENST00000364292 107 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-1027P-201ENST00000383998 107 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 MT-TT-201ENST00000387460 66 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RPL21P104-201ENST00000464143 478 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 AC007215.1-201ENST00000464893 276 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 MTND5P41-201ENST00000517498 206 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 AC005176.2-201ENST00000596933 147 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 AC099778.2-201ENST00000610904 211 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR2AP24928 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR2AP24928 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.8□□□□□ -1.96
POLR2AP24928 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR2AP24928 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-653P-201ENST00000363074 106 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-1020P-201ENST00000363684 107 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 Y_RNA.238-201ENST00000364441 102 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 Y_RNA.262-201ENST00000364641 102 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-1248P-201ENST00000391096 64 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 CYCSP48-201ENST00000417124 323 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms