Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VAMP1P23763 RNU7-99P-201ENST00000516271 62 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 YPEL5P3-201ENST00000547227 352 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 MIR4700-201ENST00000578311 74 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 POLR3GP1-201ENST00000594073 261 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 RNA5SP196-201ENST00000625967 102 ntBASIC3.09□□□□□ -1.91
VAMP1P23763 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
VAMP1P23763 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
VAMP1P23763 Y_RNA.76-201ENST00000362931 109 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 RNU6-801P-201ENST00000364087 105 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 Y_RNA.262-201ENST00000364641 102 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 RNVU1-6-201ENST00000364688 164 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.08□□□□□ -1.92
VAMP1P23763 RNA5SP424-201ENST00000390988 115 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 SNORA26.5-201ENST00000391215 123 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 HMGN2P39-201ENST00000398005 273 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 RNA5SP511-201ENST00000410487 115 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 RNU6-651P-201ENST00000411040 105 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AC007064.1-201ENST00000412238 351 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.08□□□□□ -1.92
VAMP1P23763 MTND5P15-201ENST00000434246 349 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 TBCAP1-201ENST00000436520 327 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.08□□□□□ -1.92
VAMP1P23763 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
VAMP1P23763 AC022695.1-201ENST00000522089 237 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.08□□□□□ -1.92
VAMP1P23763 AC009779.6-201ENST00000603972 165 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AC069114.2-201ENST00000604699 304 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AC004832.4-201ENST00000608952 331 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.08□□□□□ -1.92
VAMP1P23763 MIR548AY-201ENST00000617669 107 ntBASIC3.08□□□□□ -1.92
VAMP1P23763 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
VAMP1P23763 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP1P23763 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
VAMP1P23763 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP1P23763 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP1P23763 SNORA58B-201ENST00000364259 136 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 SNORA73.2-201ENST00000364946 201 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 AL135786.1-201ENST00000415892 214 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 U8.19-201ENST00000459095 133 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 RNU7-141P-201ENST00000459304 62 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 RPS29P22-201ENST00000472363 168 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 RPL23AP54-201ENST00000495129 419 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 AC110768.1-201ENST00000509222 400 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 SNORD116-28-201ENST00000516123 91 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 RNA5SP164-201ENST00000516533 110 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 AC024995.1-201ENST00000523014 93 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 MIR5692C2-201ENST00000577959 77 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 MIR4529-201ENST00000578110 78 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 MIR4480-201ENST00000582492 71 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 AC013791.1-201ENST00000616619 62 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 MIR6719-201ENST00000622428 87 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VAMP1P23763 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VAMP1P23763 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP1P23763 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP1P23763 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
VAMP1P23763 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
VAMP1P23763 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VAMP1P23763 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
VAMP1P23763 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VAMP1P23763 MIR30E-201ENST00000362104 92 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 Y_RNA.172-201ENST00000363765 102 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 MIR520G-201ENST00000385064 90 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 HMGN2P3-201ENST00000433603 273 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 HMGN2P5-201ENST00000436882 273 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.06□□□□□ -1.92
VAMP1P23763 AC233266.1-201ENST00000454518 96 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 RNU7-94P-201ENST00000459576 63 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 AC010401.1-201ENST00000463867 348 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 RPL36AP21-201ENST00000490372 323 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 MIR4715-201ENST00000584117 79 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 AC078899.2-201ENST00000595282 212 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 SNORA62.6-201ENST00000606322 83 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 AL008718.3-201ENST00000610217 321 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 AC242852.1-201ENST00000612151 96 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 MIR8059-201ENST00000620427 81 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 AC244015.1-201ENST00000622301 99 ntBASIC3.06□□□□□ -1.92
VAMP1P23763 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.06□□□□□ -1.92
VAMP1P23763 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
VAMP1P23763 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.06□□□□□ -1.92
VAMP1P23763 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
VAMP1P23763 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.05□□□□□ -1.92
VAMP1P23763 MIR367-201ENST00000362299 68 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 SNORA3A-201ENST00000364113 130 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 RNU6-200P-201ENST00000364743 107 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 Y_RNA.297-201ENST00000364950 91 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 MIR562-201ENST00000384894 95 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 DNAJC19P7-201ENST00000428811 344 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 AL162725.1-201ENST00000435405 301 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 AL135790.2-201ENST00000437701 267 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 AC104332.1-201ENST00000440471 797 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 Y_RNA.637-201ENST00000459424 114 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 RN7SL442P-201ENST00000473804 320 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.05□□□□□ -1.92
VAMP1P23763 MIR5094-201ENST00000578766 85 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 MIR6820-201ENST00000611508 62 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 MIR3653-201ENST00000625572 110 ntBASIC3.05□□□□□ -1.92
VAMP1P23763 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VAMP1P23763 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms