Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ITGA4P13612 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ITGA4P13612 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ITGA4P13612 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ITGA4P13612 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ITGA4P13612 RNU6-486P-201ENST00000363116 107 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 U3.8-201ENST00000363675 217 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 RNU6-1305P-201ENST00000364353 104 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 RNU6-746P-201ENST00000384112 109 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 MIR548B-201ENST00000385247 97 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 AL031003.1-201ENST00000404229 172 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 AL049830.2-201ENST00000480072 201 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 Y_RNA.662-201ENST00000516028 97 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 RNU6-1098P-201ENST00000516772 96 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.32□□□□□ -1.88
ITGA4P13612 AC009127.3-201ENST00000570531 403 ntBASIC3.32□□□□□ -1.88
ITGA4P13612 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.32□□□□□ -1.88
ITGA4P13612 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.32□□□□□ -1.88
ITGA4P13612 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.32□□□□□ -1.88
ITGA4P13612 RNU6-653P-201ENST00000363074 106 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.31□□□□□ -1.88
ITGA4P13612 HMGB3P3-201ENST00000510526 400 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
ITGA4P13612 MIR449C-201ENST00000516047 92 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 RNU5F-4P-201ENST00000516581 114 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 MIR3133-201ENST00000583157 78 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 RPL17P51-201ENST00000605218 238 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 U6.106-201ENST00000636360 105 ntBASIC3.31□□□□□ -1.88
ITGA4P13612 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ITGA4P13612 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ITGA4P13612 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ITGA4P13612 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ITGA4P13612 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ITGA4P13612 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ITGA4P13612 SNORA80A-201ENST00000363922 136 ntBASIC3.3□□□□□ -1.88
ITGA4P13612 Y_RNA.243-201ENST00000364481 109 ntBASIC3.3□□□□□ -1.88
ITGA4P13612 ARF4P2-201ENST00000430209 526 ntBASIC3.3□□□□□ -1.88
ITGA4P13612 AL135790.2-201ENST00000437701 267 ntBASIC3.3□□□□□ -1.88
ITGA4P13612 SNORA59A-201ENST00000459326 152 ntBASIC3.3□□□□□ -1.88
ITGA4P13612 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.3□□□□□ -1.88
ITGA4P13612 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
ITGA4P13612 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.3□□□□□ -1.88
ITGA4P13612 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.3□□□□□ -1.88
ITGA4P13612 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ITGA4P13612 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.29□□□□□ -1.88
ITGA4P13612 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ITGA4P13612 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ITGA4P13612 RNU1-72P-201ENST00000362976 153 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 Y_RNA.240-201ENST00000364469 95 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 Y_RNA.435-201ENST00000384095 112 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RNU6-187P-201ENST00000384139 106 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RNU6-1274P-201ENST00000384557 107 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 MIR586-201ENST00000385035 97 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RNU6-763P-201ENST00000390865 106 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 AL357139.1-201ENST00000407792 426 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 EEF1A1P41-201ENST00000414667 207 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 AC107083.1-201ENST00000439643 279 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 AC025750.2-201ENST00000442609 450 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 Y_RNA.637-201ENST00000459424 114 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 HMGN2P9-201ENST00000476875 229 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 SRIP1-201ENST00000489235 288 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RNU6-1278P-201ENST00000516130 107 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 RNU6-1219P-201ENST00000516143 112 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 SCARNA11.3-201ENST00000517276 130 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 AC093331.1-201ENST00000521474 169 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 MIR5692C2-201ENST00000577959 77 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.29□□□□□ -1.88
ITGA4P13612 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 U6.115-201ENST00000636045 103 ntBASIC3.29□□□□□ -1.88
ITGA4P13612 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ITGA4P13612 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ITGA4P13612 RNU6-944P-201ENST00000364023 107 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.28□□□□□ -1.88
ITGA4P13612 U8.19-201ENST00000459095 133 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 RNU6-406P-201ENST00000516470 107 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 Y_RNA.703-201ENST00000516846 111 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.28□□□□□ -1.88
ITGA4P13612 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.28□□□□□ -1.88
ITGA4P13612 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.28□□□□□ -1.88
ITGA4P13612 AC023043.3-201ENST00000593113 385 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 MIR7106-201ENST00000612419 65 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 AC021753.1-201ENST00000635724 168 ntBASIC3.28□□□□□ -1.88
ITGA4P13612 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ITGA4P13612 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
ITGA4P13612 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
ITGA4P13612 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ITGA4P13612 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ITGA4P13612 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.27□□□□□ -1.89
ITGA4P13612 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ITGA4P13612 RNU6-801P-201ENST00000364087 105 ntBASIC3.27□□□□□ -1.89
ITGA4P13612 SNORA51.4-201ENST00000364993 124 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms