Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
CHGAP10645 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHGAP10645 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHGAP10645 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.27□□□□□ -1.57
CHGAP10645 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.27□□□□□ -1.57
CHGAP10645 RNU6-117P-201ENST00000365415 107 ntBASIC5.27□□□□□ -1.57
CHGAP10645 AP000567.1-201ENST00000406413 156 ntBASIC5.27□□□□□ -1.57
CHGAP10645 RNU6-1077P-201ENST00000410506 102 ntBASIC5.27□□□□□ -1.57
CHGAP10645 RPL39P40-201ENST00000445481 146 ntBASIC5.27□□□□□ -1.57
CHGAP10645 AC016717.1-201ENST00000448918 286 ntBASIC5.27□□□□□ -1.57
CHGAP10645 AL031183.1-201ENST00000457667 207 ntBASIC5.27□□□□□ -1.57
CHGAP10645 AC107934.2-201ENST00000518653 310 ntBASIC5.27□□□□□ -1.57
CHGAP10645 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
CHGAP10645 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CHGAP10645 RNU4-35P-201ENST00000362588 141 ntBASIC5.26□□□□□ -1.57
CHGAP10645 RNU1-33P-201ENST00000364249 162 ntBASIC5.26□□□□□ -1.57
CHGAP10645 SNORD18B-201ENST00000365659 72 ntBASIC5.26□□□□□ -1.57
CHGAP10645 RNU6-136P-201ENST00000384663 107 ntBASIC5.26□□□□□ -1.57
CHGAP10645 AC017083.1-201ENST00000428093 483 ntBASIC5.26□□□□□ -1.57
CHGAP10645 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC5.26□□□□□ -1.57
CHGAP10645 ATP5EP1-201ENST00000510257 156 ntBASIC5.26□□□□□ -1.57
CHGAP10645 AC133485.4-201ENST00000561835 220 ntBASIC5.26□□□□□ -1.57
CHGAP10645 AC138907.4-201ENST00000570107 226 ntBASIC5.26□□□□□ -1.57
CHGAP10645 MIR3613-201ENST00000579844 87 ntBASIC5.26□□□□□ -1.57
CHGAP10645 U4.6-201ENST00000621618 127 ntBASIC5.26□□□□□ -1.57
CHGAP10645 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHGAP10645 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.25□□□□□ -1.57
CHGAP10645 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHGAP10645 RNU6-486P-201ENST00000363116 107 ntBASIC5.25□□□□□ -1.57
CHGAP10645 Y_RNA.114-201ENST00000363265 113 ntBASIC5.25□□□□□ -1.57
CHGAP10645 RNU6-1235P-201ENST00000384559 107 ntBASIC5.25□□□□□ -1.57
CHGAP10645 RNU2-70P-201ENST00000410718 179 ntBASIC5.25□□□□□ -1.57
CHGAP10645 AC005326.1-201ENST00000429197 123 ntBASIC5.25□□□□□ -1.57
CHGAP10645 RNU6-498P-201ENST00000459468 107 ntBASIC5.25□□□□□ -1.57
CHGAP10645 AL049873.1-201ENST00000480540 376 ntBASIC5.25□□□□□ -1.57
CHGAP10645 RNA5SP170-201ENST00000517150 101 ntBASIC5.25□□□□□ -1.57
CHGAP10645 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.25□□□□□ -1.57
CHGAP10645 MIR4513-201ENST00000581077 86 ntBASIC5.25□□□□□ -1.57
CHGAP10645 uc_338.4-201ENST00000616635 176 ntBASIC5.25□□□□□ -1.57
CHGAP10645 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC5.25□□□□□ -1.57
CHGAP10645 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHGAP10645 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHGAP10645 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.24□□□□□ -1.57
CHGAP10645 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CHGAP10645 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CHGAP10645 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHGAP10645 RNU6-1083P-201ENST00000384022 107 ntBASIC5.24□□□□□ -1.57
CHGAP10645 RNU6-1274P-201ENST00000384557 107 ntBASIC5.24□□□□□ -1.57
CHGAP10645 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.24□□□□□ -1.57
CHGAP10645 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.24□□□□□ -1.57
CHGAP10645 SNORD77.4-201ENST00000516158 81 ntBASIC5.24□□□□□ -1.57
CHGAP10645 AC097639.2-201ENST00000603159 172 ntBASIC5.24□□□□□ -1.57
CHGAP10645 AL670379.3-201ENST00000605040 251 ntBASIC5.24□□□□□ -1.57
CHGAP10645 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CHGAP10645 AL049781.1-201ENST00000623195 3585 ntBASIC5.24□□□□□ -1.57
CHGAP10645 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHGAP10645 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.23□□□□□ -1.57
CHGAP10645 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.23□□□□□ -1.57
CHGAP10645 RNA5SP354-201ENST00000391247 136 ntBASIC5.23□□□□□ -1.57
CHGAP10645 SNORA26-201ENST00000391286 122 ntBASIC5.23□□□□□ -1.57
CHGAP10645 AL603914.1-201ENST00000401964 204 ntBASIC5.23□□□□□ -1.57
CHGAP10645 MLLT10P1-201ENST00000418346 262 ntBASIC5.23□□□□□ -1.57
CHGAP10645 RNU2-27P-201ENST00000516185 142 ntBASIC5.23□□□□□ -1.57
CHGAP10645 AC108081.1-201ENST00000604358 221 ntBASIC5.23□□□□□ -1.57
CHGAP10645 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.23□□□□□ -1.57
CHGAP10645 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHGAP10645 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHGAP10645 Z82209.1-201ENST00000422141 2135 ntBASIC5.23□□□□□ -1.57
CHGAP10645 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHGAP10645 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGAP10645 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGAP10645 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGAP10645 RNU6-944P-201ENST00000364023 107 ntBASIC5.22□□□□□ -1.57
CHGAP10645 Y_RNA.203-201ENST00000364106 102 ntBASIC5.22□□□□□ -1.57
CHGAP10645 RNU6-1240P-201ENST00000365155 104 ntBASIC5.22□□□□□ -1.57
CHGAP10645 AP001486.1-201ENST00000463339 476 ntBASIC5.22□□□□□ -1.57
CHGAP10645 TRBV12-2-201ENST00000489763 344 ntBASIC5.22□□□□□ -1.57
CHGAP10645 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.22□□□□□ -1.57
CHGAP10645 RNU6-1061P-201ENST00000516530 99 ntBASIC5.22□□□□□ -1.57
CHGAP10645 RNU2-34P-201ENST00000516534 121 ntBASIC5.22□□□□□ -1.57
CHGAP10645 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGAP10645 AL929325.1-201ENST00000603096 117 ntBASIC5.22□□□□□ -1.57
CHGAP10645 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CHGAP10645 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHGAP10645 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.21□□□□□ -1.58
CHGAP10645 SNORA38.1-201ENST00000364172 131 ntBASIC5.21□□□□□ -1.58
CHGAP10645 AC126124.2-201ENST00000413542 321 ntBASIC5.21□□□□□ -1.58
CHGAP10645 AC063976.4-201ENST00000421971 163 ntBASIC5.21□□□□□ -1.58
CHGAP10645 RPL30P4-201ENST00000429309 333 ntBASIC5.21□□□□□ -1.58
CHGAP10645 AC080013.2-201ENST00000460866 323 ntBASIC5.21□□□□□ -1.58
CHGAP10645 RPS27P22-201ENST00000478056 241 ntBASIC5.21□□□□□ -1.58
CHGAP10645 RNU6-126P-201ENST00000516685 103 ntBASIC5.21□□□□□ -1.58
CHGAP10645 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.21□□□□□ -1.58
CHGAP10645 AC018630.3-201ENST00000542637 96 ntBASIC5.21□□□□□ -1.58
CHGAP10645 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHGAP10645 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHGAP10645 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHGAP10645 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHGAP10645 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHGAP10645 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms