Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC245047.3-201ENST00000429428 127 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 AL359672.1-201ENST00000442302 409 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.87□□□□□ -2.27
ERCC1P07992 SNORA31.2-201ENST00000516019 134 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 Y_RNA.673-201ENST00000516306 88 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.87□□□□□ -2.27
ERCC1P07992 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.87□□□□□ -2.27
ERCC1P07992 AL157687.1-201ENST00000554853 619 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 MIR5695-201ENST00000579717 85 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 SNORD114-21-201ENST00000606412 72 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 MIR8076-201ENST00000611401 83 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 AL021879.1-201ENST00000611756 288 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 AL513423.1-201ENST00000621695 132 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
ERCC1P07992 ZNF204P-201ENST00000416749 2397 ntBASIC0.87□□□□□ -2.27
ERCC1P07992 RNU4-79P-201ENST00000362764 141 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 RNU6-784P-201ENST00000384330 106 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 MRPL42P3-201ENST00000401492 326 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 RN7SKP142-201ENST00000411236 328 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 POLR2J4-204ENST00000418424 324 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 MTCO2P19-201ENST00000427513 598 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.86□□□□□ -2.27
ERCC1P07992 MTND3P7-201ENST00000474435 343 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 AC103851.1-201ENST00000506833 274 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 RNU1-117P-201ENST00000517041 158 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
ERCC1P07992 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.86□□□□□ -2.27
ERCC1P07992 AC004584.2-201ENST00000570407 410 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 MIR4528-201ENST00000577763 90 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 MIR5692C1-201ENST00000585309 91 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 SNORD11B-201ENST00000607707 90 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 AL391262.2-201ENST00000622466 494 ntBASIC0.86□□□□□ -2.27
ERCC1P07992 SNORD114-22-201ENST00000365423 72 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNU6-348P-201ENST00000384386 107 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNU6-505P-201ENST00000384427 107 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 MIR521-1-201ENST00000384902 87 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNU6-910P-201ENST00000390844 107 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNU6-440P-201ENST00000390882 105 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 SNORD37.1-201ENST00000390968 65 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNU6-325P-201ENST00000411132 105 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.85□□□□□ -2.27
ERCC1P07992 AC005002.2-201ENST00000438228 269 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.85□□□□□ -2.27
ERCC1P07992 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.85□□□□□ -2.27
ERCC1P07992 SCARNA16.2-201ENST00000516520 172 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 RNA5SP54-201ENST00000516951 92 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.85□□□□□ -2.27
ERCC1P07992 SNORD3E-202ENST00000627253 216 ntBASIC0.85□□□□□ -2.27
ERCC1P07992 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.84□□□□□ -2.27
ERCC1P07992 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNU6-245P-201ENST00000384020 107 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNU6-214P-201ENST00000384130 107 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNY3P9-201ENST00000384727 106 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 MIR450B-201ENST00000401182 78 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNU6-1186P-201ENST00000410429 97 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNU6-1054P-201ENST00000411293 104 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.84□□□□□ -2.27
ERCC1P07992 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.84□□□□□ -2.27
ERCC1P07992 snoU13.18-201ENST00000459483 104 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RPL23AP75-201ENST00000491601 451 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 MTCO1P29-201ENST00000496868 288 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AC092436.3-201ENST00000511788 257 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 SNORA19.2-201ENST00000516013 114 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 RNU6-1038P-201ENST00000516516 104 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AL137100.2-201ENST00000555786 315 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 CPDP1-201ENST00000579660 283 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AC008088.1-201ENST00000580993 280 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AL162424.1-201ENST00000602325 221 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AL121757.2-201ENST00000611223 313 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 AC073349.3-201ENST00000617616 186 ntBASIC0.84□□□□□ -2.27
ERCC1P07992 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
ERCC1P07992 RNU4-76P-201ENST00000364509 141 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.83□□□□□ -2.28
ERCC1P07992 RNU6-933P-201ENST00000384424 107 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 Y_RNA.508-201ENST00000384502 114 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 RNA5SP504-201ENST00000410676 117 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.83□□□□□ -2.28
ERCC1P07992 AL353193.1-201ENST00000421444 268 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC063976.4-201ENST00000421971 163 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 MRPS10P2-201ENST00000431226 381 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AL606489.2-201ENST00000433886 234 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.83□□□□□ -2.28
ERCC1P07992 HMGB1P29-201ENST00000505659 499 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC105758.1-201ENST00000506038 399 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 SNORA40.12-201ENST00000516329 111 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 RNA5SP454-201ENST00000517231 127 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 MTND1P5-201ENST00000517906 940 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC011604.1-201ENST00000545978 196 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms