Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.19□□□□□ -2.22
IFNB1P01574 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.19□□□□□ -2.22
IFNB1P01574 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.19□□□□□ -2.22
IFNB1P01574 TPRKBP2-201ENST00000565969 475 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 AL390123.1-201ENST00000603216 237 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 RNU6-89P-201ENST00000606519 100 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 AC245008.1-201ENST00000608123 476 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 AL359880.1-201ENST00000621879 266 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 MIR6863-201ENST00000636112 90 ntBASIC1.19□□□□□ -2.22
IFNB1P01574 MTCO3P40-201ENST00000392516 676 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 SNORA11.2-201ENST00000408318 127 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 SEPT14P3-201ENST00000439401 183 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AL732372.2-207ENST00000445840 183 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 SEPT14P2-201ENST00000453405 183 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 RNU7-94P-201ENST00000459576 63 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AC093852.1-201ENST00000503587 266 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 SEPT14P4-201ENST00000513445 186 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 RNU6-405P-201ENST00000516637 110 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 Y_RNA.693-201ENST00000516641 110 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 FO082796.1-201ENST00000523795 183 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AL137100.2-201ENST00000555786 315 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.18□□□□□ -2.22
IFNB1P01574 AL162424.1-201ENST00000602325 221 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AC022217.4-201ENST00000604389 163 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 RN7SKP299-201ENST00000606679 301 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AL353997.5-201ENST00000618886 171 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 AL513423.1-201ENST00000621695 132 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 OR4G1P-203ENST00000641984 1631 ntBASIC1.18□□□□□ -2.22
IFNB1P01574 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
IFNB1P01574 RNU6-254P-201ENST00000363377 107 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.17□□□□□ -2.22
IFNB1P01574 Y_RNA.409-201ENST00000383990 98 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 MIR153-2-201ENST00000385225 87 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
IFNB1P01574 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 MIR1185-2-201ENST00000408687 86 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.17□□□□□ -2.22
IFNB1P01574 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 SNORA31.10-201ENST00000516482 106 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 RNU1-117P-201ENST00000517041 158 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 AC015712.3-201ENST00000559380 164 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 MIR8054-201ENST00000620877 86 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
IFNB1P01574 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
IFNB1P01574 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
IFNB1P01574 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
IFNB1P01574 RNU6-1266P-201ENST00000362794 105 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 SNORA25-201ENST00000384384 134 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 MRPL42P3-201ENST00000401492 326 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 AC108667.1-201ENST00000428618 249 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 AL606517.2-201ENST00000442855 241 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.16□□□□□ -2.22
IFNB1P01574 MTCO2P30-201ENST00000503662 364 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 RNU6-58P-201ENST00000517143 103 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.16□□□□□ -2.22
IFNB1P01574 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.16□□□□□ -2.22
IFNB1P01574 MIR3611-201ENST00000584484 83 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.16□□□□□ -2.22
IFNB1P01574 AL158209.2-201ENST00000619266 216 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 AC124864.2-201ENST00000624736 186 ntBASIC1.16□□□□□ -2.22
IFNB1P01574 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
IFNB1P01574 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
IFNB1P01574 Y_RNA.319-201ENST00000365138 92 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 RNU6-259P-201ENST00000383999 107 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 RNU6-790P-201ENST00000384479 105 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 AL034345.1-201ENST00000407768 123 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.15□□□□□ -2.23
IFNB1P01574 PCMTD1P1-201ENST00000455560 355 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 RNU7-187P-201ENST00000458985 68 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.15□□□□□ -2.23
IFNB1P01574 AC083904.1-201ENST00000487828 231 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 RNU7-99P-201ENST00000516271 62 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 SUMO2P16-201ENST00000519475 264 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.15□□□□□ -2.23
IFNB1P01574 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
IFNB1P01574 AL513534.2-201ENST00000603836 250 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 U6.73-201ENST00000619194 103 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
IFNB1P01574 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
IFNB1P01574 RNU6-280P-201ENST00000364145 104 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 SNORD116-9-201ENST00000384000 95 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 SNORD116-3-201ENST00000384287 95 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 SNORD116-7-201ENST00000384404 95 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 SNORD116-5-201ENST00000384462 95 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 MIR32-201ENST00000384965 70 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 MIR487A-201ENST00000385009 80 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 AL590002.1-201ENST00000406554 418 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 AC245047.3-201ENST00000429428 127 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.14□□□□□ -2.23
IFNB1P01574 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 RNA5SP454-201ENST00000517231 127 ntBASIC1.14□□□□□ -2.23
IFNB1P01574 RNU7-128P-201ENST00000517247 62 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms