| UPP2 | O95045 | RXFP1-205 | ENST00000448688 | 3861 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| UPP2 | O95045 | PCDH11X-208 | ENST00000504220 | 4017 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| UPP2 | O95045 | TNNI3K-201 | ENST00000326637 | 3001 nt | APPRIS P1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC100800.1-201 | ENST00000524252 | 2054 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | HERC4-204 | ENST00000395198 | 4445 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC004944.1-201 | ENST00000517807 | 3059 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | snoU2_19.1-201 | ENST00000362361 | 80 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | SNORA51.4-201 | ENST00000364993 | 124 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | SNORD14D-201 | ENST00000384390 | 87 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | MIR490-201 | ENST00000384865 | 128 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RNA5SP127-201 | ENST00000411051 | 133 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC023141.4-201 | ENST00000412031 | 328 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AF228730.3-201 | ENST00000436691 | 102 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | BX510359.1-201 | ENST00000456973 | 237 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC107626.1-201 | ENST00000471084 | 183 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC021205.2-201 | ENST00000480069 | 347 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC024022.1-202 | ENST00000508911 | 394 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RNU6ATAC17P-201 | ENST00000516074 | 71 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | LINC02459-201 | ENST00000551761 | 474 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RPL23AP91-201 | ENST00000569211 | 455 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RNU6-94P-201 | ENST00000607728 | 107 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | SHOC2-201 | ENST00000265277 | 3691 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | PLCL1-203 | ENST00000437704 | 5979 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | ADGRG2-205 | ENST00000357991 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | NLGN1-201 | ENST00000361589 | 5092 nt | APPRIS P1 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| UPP2 | O95045 | LRRTM4-201 | ENST00000409088 | 3616 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | MTUS1-228 | ENST00000544260 | 3650 nt | TSL 2 BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC006504.1-201 | ENST00000562493 | 3666 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | SNORA7.2-201 | ENST00000364446 | 145 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | Y_RNA.323-201 | ENST00000365157 | 109 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RNU6-1152P-201 | ENST00000384576 | 107 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | Y_RNA.544-201 | ENST00000384650 | 113 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | SNORA1.3-201 | ENST00000384676 | 136 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | TRAJ18-201 | ENST00000390519 | 66 nt | APPRIS P1 BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | TRAJ2-201 | ENST00000390535 | 66 nt | APPRIS P1 BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | Z92545.1-201 | ENST00000411782 | 234 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | AC009292.2-201 | ENST00000558889 | 291 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | MIR486-1-201 | ENST00000612171 | 68 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | CCNYL2-203 | ENST00000638057 | 730 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | LRFN5-204 | ENST00000554171 | 4253 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| UPP2 | O95045 | TMPRSS11A-202 | ENST00000508048 | 3247 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | RNA5SP50-201 | ENST00000363731 | 107 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | SNORD78.1-201 | ENST00000390866 | 65 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | SNORA11.2-201 | ENST00000408318 | 127 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AGTR1-204 | ENST00000418473 | 2071 nt | TSL 5 BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AL645939.1-201 | ENST00000453429 | 797 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | SNORD11-201 | ENST00000459124 | 84 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC080013.2-201 | ENST00000460866 | 323 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | GNG2-205 | ENST00000554736 | 569 nt | APPRIS P1 TSL 4 BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC015720.1-201 | ENST00000565251 | 277 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AL355512.1-202 | ENST00000607952 | 209 nt | TSL 5 BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | PPIP5K2-217 | ENST00000627916 | 6010 nt | APPRIS ALT2 TSL 5 BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | ATP2B1-202 | ENST00000359142 | 6977 nt | TSL 5 BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | TOP2A-201 | ENST00000423485 | 5758 nt | APPRIS P1 TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | GCSAML-203 | ENST00000366491 | 4130 nt | APPRIS ALT2 TSL 2 BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | TRIM36-201 | ENST00000282369 | 4050 nt | APPRIS P1 TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | ERBB4-203 | ENST00000402597 | 11699 nt | TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | NDST4-201 | ENST00000264363 | 3351 nt | APPRIS P1 TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | CDH9-201 | ENST00000231021 | 3079 nt | APPRIS P1 TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC087521.2-201 | ENST00000499066 | 2190 nt | TSL 2 BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | C8orf34-202 | ENST00000337103 | 3652 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AP001486.2-201 | ENST00000561652 | 5113 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | MIR494-201 | ENST00000349529 | 81 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | SNORA1-201 | ENST00000384107 | 130 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | MIR199A2-201 | ENST00000385289 | 110 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AL138878.1-201 | ENST00000405131 | 347 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | ATP5A1P2-201 | ENST00000412323 | 255 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AL353705.1-201 | ENST00000433468 | 480 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC109327.2-201 | ENST00000448339 | 378 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC083906.5-201 | ENST00000503722 | 328 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | KRTAP13-6P-201 | ENST00000508999 | 371 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | GNRHR2P1-201 | ENST00000555315 | 631 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AL365205.2-201 | ENST00000594586 | 68 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | RNU1-30P-201 | ENST00000606575 | 163 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC025521.1-201 | ENST00000621624 | 286 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | 5S_rRNA.13-201 | ENST00000622298 | 123 nt | BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | XRN1-202 | ENST00000392981 | 5383 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | MME-211 | ENST00000492661 | 2854 nt | APPRIS P1 TSL 2 BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | LBR-202 | ENST00000338179 | 3812 nt | APPRIS P1 TSL 5 BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC019117.3-201 | ENST00000637807 | 3523 nt | APPRIS P1 TSL 5 BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | USH2A-201 | ENST00000307340 | 18883 nt | APPRIS P1 TSL 1 (best) BASIC | 4.07 | □□□□□ -1.76 | | |
| UPP2 | O95045 | ZBBX-201 | ENST00000307529 | 3071 nt | APPRIS ALT2 TSL 5 BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | Y_RNA.66-201 | ENST00000362862 | 102 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | Y_RNA.366-201 | ENST00000365540 | 102 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | MIR450A2-201 | ENST00000385022 | 100 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | IGLV5-37-201 | ENST00000390300 | 374 nt | APPRIS P1 BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | RN7SKP177-201 | ENST00000410567 | 355 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | MTATP6P21-201 | ENST00000440681 | 189 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC008155.2-201 | ENST00000464337 | 397 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | RNA5SP20-201 | ENST00000515976 | 84 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | RNU6-1098P-201 | ENST00000516772 | 96 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | AC113192.5-201 | ENST00000528779 | 486 nt | TSL 2 BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | MIR3129-201 | ENST00000581095 | 76 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | 5S_rRNA.11-201 | ENST00000618635 | 84 nt | BASIC | 4.06 | □□□□□ -1.76 | | |
| UPP2 | O95045 | POSTN-203 | ENST00000379747 | 3373 nt | APPRIS P3 TSL 1 (best) BASIC | 4.06 | □□□□□ -1.76 | | |