Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC019205.3-201ENST00000424573 156 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 AC016700.2-201ENST00000446011 156 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 U8.21-201ENST00000459536 136 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 AC015911.1-201ENST00000495111 156 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 RNU2-34P-201ENST00000516534 121 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 AL133153.1-201ENST00000557756 303 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 MIR3681-201ENST00000580089 72 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 VN1R87P-201ENST00000596706 487 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 AL670379.3-201ENST00000605040 251 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 AC253576.2-201ENST00000618815 580 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 AC098679.4-201ENST00000624241 654 ntBASIC-0.94□□□□□ -2.56
LTN1O94822 MIR412-201ENST00000362142 91 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 RNU6-395P-201ENST00000365662 106 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.95□□□□□ -2.56
LTN1O94822 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.95□□□□□ -2.56
LTN1O94822 USP9YP11-201ENST00000427537 717 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 AC093899.1-201ENST00000457984 376 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 AC079382.1-201ENST00000493346 557 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 AC107401.1-201ENST00000503426 685 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 AC026616.1-201ENST00000523157 525 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.95□□□□□ -2.56
LTN1O94822 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.95□□□□□ -2.56
LTN1O94822 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 U6.108-201ENST00000637764 58 ntBASIC-0.95□□□□□ -2.56
LTN1O94822 MIR454-201ENST00000390180 115 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 SNORD100-201ENST00000408573 76 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 AC106883.1-201ENST00000418805 562 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.96□□□□□ -2.56
LTN1O94822 MRPS10P2-201ENST00000431226 381 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 MTCYBP39-201ENST00000437562 491 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.96□□□□□ -2.56
LTN1O94822 AP000870.1-201ENST00000472927 406 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 RPL39P34-201ENST00000477141 156 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 RNU7-129P-201ENST00000516128 62 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.96□□□□□ -2.56
LTN1O94822 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.96□□□□□ -2.56
LTN1O94822 AL445264.1-201ENST00000621719 171 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 MIR891A-201ENST00000401237 79 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 MRPL42P3-201ENST00000401492 326 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 ELOCP21-201ENST00000412558 336 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.96□□□□□ -2.56
LTN1O94822 AC007327.1-201ENST00000447461 264 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 MTCO3P15-201ENST00000526563 574 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 AC174048.1-201ENST00000603389 144 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 MIR1264-201ENST00000616374 69 ntBASIC-0.96□□□□□ -2.56
LTN1O94822 RNU6-78P-201ENST00000362897 107 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.97□□□□□ -2.56
LTN1O94822 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.97□□□□□ -2.56
LTN1O94822 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.97□□□□□ -2.56
LTN1O94822 AC007547.1-201ENST00000462177 490 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 RNU6-760P-201ENST00000516078 97 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
LTN1O94822 AP001372.4-201ENST00000524889 472 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.97□□□□□ -2.56
LTN1O94822 AC090897.1-201ENST00000580909 226 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 AL138889.2-201ENST00000603883 242 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 SNORA28-201ENST00000606769 126 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 AC005332.6-201ENST00000613178 446 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 MIR4788-201ENST00000639104 80 ntBASIC-0.97□□□□□ -2.56
LTN1O94822 SNORA36.1-201ENST00000363424 132 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 RNU6-527P-201ENST00000363425 104 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 MIR520C-201ENST00000385005 87 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 SNORA12.1-201ENST00000390873 148 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 MIR1283-1-201ENST00000408494 87 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 RNU4-22P-201ENST00000411058 166 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.98□□□□□ -2.57
LTN1O94822 AC007215.1-201ENST00000464893 276 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 AC091021.1-201ENST00000468051 388 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
LTN1O94822 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.98□□□□□ -2.57
LTN1O94822 RNU4-84P-201ENST00000364200 139 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 SNORD32A-201ENST00000364805 84 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 AC110760.3-201ENST00000598794 467 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.98□□□□□ -2.57
LTN1O94822 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 MIR587-201ENST00000384845 96 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 MIR1207-201ENST00000408249 87 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 RNU6-953P-201ENST00000459154 107 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.99□□□□□ -2.57
LTN1O94822 LRRC34P1-201ENST00000542742 915 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 AC138915.2-201ENST00000569776 97 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 MIR15A-201ENST00000607334 83 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 AC104073.3-201ENST00000610942 955 ntBASIC-0.99□□□□□ -2.57
LTN1O94822 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1□□□□□ -2.57
LTN1O94822 RNU6-562P-201ENST00000362731 107 ntBASIC-1□□□□□ -2.57
LTN1O94822 MIR300-201ENST00000401138 83 ntBASIC-1□□□□□ -2.57
LTN1O94822 AC006366.1-201ENST00000422002 759 ntBASIC-1□□□□□ -2.57
LTN1O94822 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1□□□□□ -2.57
LTN1O94822 RNU2-60P-201ENST00000517290 128 ntBASIC-1□□□□□ -2.57
LTN1O94822 AP002453.2-201ENST00000533503 320 ntBASIC-1□□□□□ -2.57
LTN1O94822 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1□□□□□ -2.57
LTN1O94822 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1□□□□□ -2.57
LTN1O94822 AC115989.2-201ENST00000578640 563 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms