Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF40AO75400 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF40AO75400 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF40AO75400 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
PRPF40AO75400 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
PRPF40AO75400 RNU6-1272P-201ENST00000362776 107 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 RNU6-438P-201ENST00000365561 103 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 MIR1185-2-201ENST00000408687 86 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 MIR1289-1-201ENST00000408836 144 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 RNU2-63P-201ENST00000410792 194 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 RNA5SP120-201ENST00000410900 112 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 AL161788.1-201ENST00000441805 169 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 SUMO1P2-201ENST00000452524 304 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF40AO75400 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.61□□□□□ -1.83
PRPF40AO75400 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.61□□□□□ -1.83
PRPF40AO75400 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.61□□□□□ -1.83
PRPF40AO75400 MIR3684-201ENST00000579779 74 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 MIR5195-201ENST00000583555 115 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 snoU18.1-201ENST00000629629 71 ntBASIC3.61□□□□□ -1.83
PRPF40AO75400 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
PRPF40AO75400 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PRPF40AO75400 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF40AO75400 Y_RNA.150-201ENST00000363562 102 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 SNORD31B-201ENST00000364977 69 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 RNA5SP240-201ENST00000365355 128 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 DYNLT3P1-201ENST00000378574 347 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 RNU6-546P-201ENST00000383991 107 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 MIR491-201ENST00000384877 84 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PRPF40AO75400 RNU2-32P-201ENST00000411193 191 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 AC005326.1-201ENST00000429197 123 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
PRPF40AO75400 AP004217.1-201ENST00000480579 346 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 RN7SL20P-201ENST00000488827 297 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF40AO75400 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF40AO75400 ATP5EP1-201ENST00000510257 156 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 SNORA70.12-201ENST00000516084 153 ntBASIC3.6□□□□□ -1.83
PRPF40AO75400 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF40AO75400 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF40AO75400 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF40AO75400 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRPF40AO75400 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 RNU6-211P-201ENST00000384047 107 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 AL139095.1-201ENST00000404326 391 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF40AO75400 MIR4506-201ENST00000584693 77 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF40AO75400 AC011921.3-201ENST00000605540 361 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 snoZ196.1-201ENST00000625269 89 ntBASIC3.59□□□□□ -1.83
PRPF40AO75400 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF40AO75400 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PRPF40AO75400 Y_RNA.262-201ENST00000364641 102 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 SNORA9-201ENST00000384215 133 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 SNORA40.19-201ENST00000390846 128 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 AL603908.1-201ENST00000406098 201 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 AL357139.1-201ENST00000407792 426 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 RNU7-120P-201ENST00000459334 63 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 RN7SL807P-201ENST00000470923 297 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 AC022616.8-201ENST00000533569 253 ntBASIC3.58□□□□□ -1.84
PRPF40AO75400 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF40AO75400 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF40AO75400 SNORD14D-201ENST00000384390 87 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 MIR181B1-201ENST00000385240 110 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 RNU6-855P-201ENST00000410395 104 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 BMS1P22-201ENST00000414726 313 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.57□□□□□ -1.84
PRPF40AO75400 RPL23AP58-201ENST00000440453 469 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 RNA5SP490-201ENST00000517141 136 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 MIR3651-201ENST00000630427 90 ntBASIC3.57□□□□□ -1.84
PRPF40AO75400 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF40AO75400 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF40AO75400 RNU6-743P-201ENST00000364151 106 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 SNORA38.1-201ENST00000364172 131 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 RNU6-923P-201ENST00000364753 107 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 RNU6-1062P-201ENST00000383908 107 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 RNU6-975P-201ENST00000384296 105 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 MIR23A-201ENST00000385245 73 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 RNU6-57P-201ENST00000411348 103 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF40AO75400 AC104332.1-201ENST00000440471 797 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 AC107393.1-201ENST00000512403 346 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF40AO75400 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF40AO75400 AL355297.2-201ENST00000604792 129 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 AC004832.5-201ENST00000608677 401 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 AL008718.3-201ENST00000610217 321 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 AC091953.5-201ENST00000622919 233 ntBASIC3.56□□□□□ -1.84
PRPF40AO75400 AC108206.1-201ENST00000570186 4159 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF40AO75400 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF40AO75400 Y_RNA.180-201ENST00000363867 113 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 Y_RNA.304-201ENST00000365011 112 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 Y_RNA.308-201ENST00000365043 101 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 RNA5SP274-201ENST00000410484 108 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 RN7SKP123-201ENST00000410732 291 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms