Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 Y_RNA.772-201ENST00000606692 102 ntBASIC2.34□□□□□ -2.03
LDB3O75112 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LDB3O75112 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LDB3O75112 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.34□□□□□ -2.04
LDB3O75112 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
LDB3O75112 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.33□□□□□ -2.04
LDB3O75112 Y_RNA.76-201ENST00000362931 109 ntBASIC2.33□□□□□ -2.04
LDB3O75112 RNU6-200P-201ENST00000364743 107 ntBASIC2.33□□□□□ -2.04
LDB3O75112 MIR329-1-201ENST00000385028 80 ntBASIC2.33□□□□□ -2.04
LDB3O75112 RNU6-159P-201ENST00000391080 106 ntBASIC2.33□□□□□ -2.04
LDB3O75112 SNORD58.1-201ENST00000391313 66 ntBASIC2.33□□□□□ -2.04
LDB3O75112 AC012306.1-201ENST00000423267 114 ntBASIC2.33□□□□□ -2.04
LDB3O75112 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.33□□□□□ -2.04
LDB3O75112 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB3O75112 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.33□□□□□ -2.04
LDB3O75112 AL034555.1-201ENST00000604816 211 ntBASIC2.33□□□□□ -2.04
LDB3O75112 AC005296.1-201ENST00000616145 209 ntBASIC2.33□□□□□ -2.04
LDB3O75112 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
LDB3O75112 U6.104-201ENST00000637979 90 ntBASIC2.33□□□□□ -2.04
LDB3O75112 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LDB3O75112 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LDB3O75112 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LDB3O75112 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LDB3O75112 RNU6-1159P-201ENST00000362933 107 ntBASIC2.32□□□□□ -2.04
LDB3O75112 SNORD81.1-201ENST00000363064 77 ntBASIC2.32□□□□□ -2.04
LDB3O75112 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
LDB3O75112 Y_RNA.478-201ENST00000384358 107 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR518C-201ENST00000384822 101 ntBASIC2.32□□□□□ -2.04
LDB3O75112 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.32□□□□□ -2.04
LDB3O75112 RNU6-826P-201ENST00000516827 104 ntBASIC2.32□□□□□ -2.04
LDB3O75112 AC091144.1-201ENST00000519573 138 ntBASIC2.32□□□□□ -2.04
LDB3O75112 AC004486.1-201ENST00000546846 233 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR3923-201ENST00000579521 83 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR3670-2-201ENST00000582974 65 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR4672-201ENST00000583126 81 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR3670-1-201ENST00000584160 65 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR3670-3-201ENST00000584855 65 ntBASIC2.32□□□□□ -2.04
LDB3O75112 MIR3670-4-201ENST00000612260 65 ntBASIC2.32□□□□□ -2.04
LDB3O75112 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB3O75112 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
LDB3O75112 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB3O75112 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB3O75112 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.32□□□□□ -2.04
LDB3O75112 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
LDB3O75112 RNU6-873P-201ENST00000363833 107 ntBASIC2.31□□□□□ -2.04
LDB3O75112 Y_RNA.352-201ENST00000365439 102 ntBASIC2.31□□□□□ -2.04
LDB3O75112 Y_RNA.446-201ENST00000384178 104 ntBASIC2.31□□□□□ -2.04
LDB3O75112 RNU6-1145P-201ENST00000384246 107 ntBASIC2.31□□□□□ -2.04
LDB3O75112 Y_RNA.515-201ENST00000384535 112 ntBASIC2.31□□□□□ -2.04
LDB3O75112 RNU6-541P-201ENST00000384709 110 ntBASIC2.31□□□□□ -2.04
LDB3O75112 MIR548H3-201ENST00000408771 118 ntBASIC2.31□□□□□ -2.04
LDB3O75112 AL139156.1-201ENST00000412785 841 ntBASIC2.31□□□□□ -2.04
LDB3O75112 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
LDB3O75112 AC010095.1-201ENST00000443543 144 ntBASIC2.31□□□□□ -2.04
LDB3O75112 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.31□□□□□ -2.04
LDB3O75112 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
LDB3O75112 RN7SKP49-201ENST00000516675 260 ntBASIC2.31□□□□□ -2.04
LDB3O75112 RRN3P3-201ENST00000549207 578 ntBASIC2.31□□□□□ -2.04
LDB3O75112 CYP4A27P-201ENST00000567218 190 ntBASIC2.31□□□□□ -2.04
LDB3O75112 MIR4423-201ENST00000580922 80 ntBASIC2.31□□□□□ -2.04
LDB3O75112 RPL30P11-203ENST00000598995 310 ntBASIC2.31□□□□□ -2.04
LDB3O75112 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.31□□□□□ -2.04
LDB3O75112 AC127459.3-201ENST00000624328 466 ntBASIC2.31□□□□□ -2.04
LDB3O75112 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LDB3O75112 Z82195.2-201ENST00000612348 18351 ntBASIC2.3□□□□□ -2.04
LDB3O75112 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
LDB3O75112 RNU6-626P-201ENST00000363354 107 ntBASIC2.3□□□□□ -2.04
LDB3O75112 Y_RNA.150-201ENST00000363562 102 ntBASIC2.3□□□□□ -2.04
LDB3O75112 RNY1-201ENST00000364228 113 ntBASIC2.3□□□□□ -2.04
LDB3O75112 RNU6-290P-201ENST00000365212 101 ntBASIC2.3□□□□□ -2.04
LDB3O75112 DEFA7P-201ENST00000382676 285 ntBASIC2.3□□□□□ -2.04
LDB3O75112 RNU6-20P-201ENST00000384106 107 ntBASIC2.3□□□□□ -2.04
LDB3O75112 SNORD63-201ENST00000384262 68 ntBASIC2.3□□□□□ -2.04
LDB3O75112 RNU6-1072P-201ENST00000384703 107 ntBASIC2.3□□□□□ -2.04
LDB3O75112 RNU6-443P-201ENST00000384780 107 ntBASIC2.3□□□□□ -2.04
LDB3O75112 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LDB3O75112 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
LDB3O75112 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB3O75112 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.3□□□□□ -2.04
LDB3O75112 RNU7-26P-201ENST00000458980 63 ntBASIC2.3□□□□□ -2.04
LDB3O75112 RPS23P5-201ENST00000495419 428 ntBASIC2.3□□□□□ -2.04
LDB3O75112 SERF1AP1-201ENST00000514575 187 ntBASIC2.3□□□□□ -2.04
LDB3O75112 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB3O75112 AL512605.2-201ENST00000592972 256 ntBASIC2.3□□□□□ -2.04
LDB3O75112 MZT1P2-201ENST00000604387 248 ntBASIC2.3□□□□□ -2.04
LDB3O75112 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.3□□□□□ -2.04
LDB3O75112 U2.14-201ENST00000615943 113 ntBASIC2.3□□□□□ -2.04
LDB3O75112 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB3O75112 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LDB3O75112 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB3O75112 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LDB3O75112 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
LDB3O75112 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
LDB3O75112 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LDB3O75112 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.3□□□□□ -2.04
LDB3O75112 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDB3O75112 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LDB3O75112 SNORD115-8-201ENST00000363856 82 ntBASIC2.29□□□□□ -2.04
LDB3O75112 RNU6-280P-201ENST00000364145 104 ntBASIC2.29□□□□□ -2.04
LDB3O75112 SNORD115-38-201ENST00000365037 82 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms