Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CYP4A27P-201ENST00000567218 190 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 MIR4724-201ENST00000579485 89 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 SNRPGP20-201ENST00000604477 205 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM13O60858 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM13O60858 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM13O60858 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM13O60858 Y_RNA.341-201ENST00000365341 102 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 Y_RNA.361-201ENST00000365515 120 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AL359837.1-201ENST00000381357 287 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 Y_RNA.630-201ENST00000411370 108 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC005300.1-201ENST00000428401 373 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AL158147.1-201ENST00000443970 75 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC103975.1-201ENST00000482506 483 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 RNU1-95P-201ENST00000516357 160 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 RNU1-128P-201ENST00000516704 160 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC090142.3-201ENST00000519012 385 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM13O60858 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM13O60858 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC009163.5-201ENST00000575421 637 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC120024.3-201ENST00000603167 156 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC009093.8-201ENST00000641769 292 ntBASIC3.2□□□□□ -1.9
TRIM13O60858 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM13O60858 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM13O60858 AC008555.8-201ENST00000623602 2168 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 MAPK10-266ENST00000641066 6555 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TRIM13O60858 MIR367-201ENST00000362299 68 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 RNU6-144P-201ENST00000383951 107 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 U3.26-201ENST00000391236 204 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 MIR208B-201ENST00000401172 77 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM13O60858 CYCSP49-201ENST00000420810 319 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AC012308.1-201ENST00000451232 178 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AC106707.2-201ENST00000484182 374 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 RNU6-581P-201ENST00000516214 105 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AC090897.2-201ENST00000581715 130 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AC011471.1-201ENST00000585766 187 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AC024220.1-201ENST00000603675 484 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
TRIM13O60858 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TRIM13O60858 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM13O60858 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM13O60858 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM13O60858 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM13O60858 Y_RNA.116-201ENST00000363292 103 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RNU1-64P-201ENST00000365443 163 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RNY3P5-201ENST00000384127 102 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RNU6-198P-201ENST00000384258 104 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RNU6-622P-201ENST00000384272 103 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 SNORA48.5-201ENST00000391143 135 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 AL512604.1-201ENST00000404812 257 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RNA5SP390-201ENST00000410191 113 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RNU7-23P-201ENST00000459465 62 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RN7SL385P-201ENST00000468873 276 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 RPS29P24-201ENST00000486345 171 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 Y_RNA.692-201ENST00000516627 105 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 AL121772.2-201ENST00000614331 297 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM13O60858 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.18□□□□□ -1.9
TRIM13O60858 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM13O60858 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM13O60858 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM13O60858 MIR450A1-201ENST00000362262 91 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 RNU6-1164P-201ENST00000364428 107 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 RNU6-487P-201ENST00000365430 104 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 SNORA20B-201ENST00000384220 132 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 MIR548A3-201ENST00000385297 97 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
TRIM13O60858 AC133485.4-201ENST00000561835 220 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 AC138907.4-201ENST00000570107 226 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 SNORD98-201ENST00000636377 67 ntBASIC3.17□□□□□ -1.9
TRIM13O60858 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM13O60858 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
TRIM13O60858 AC004944.1-201ENST00000517807 3059 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 SNORD87-201ENST00000364849 89 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 SNORD58C-201ENST00000365223 64 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 SNORA5A-201ENST00000384111 134 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 RNA5SP504-201ENST00000410676 117 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AC004866.1-201ENST00000411748 78 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AC245047.4-201ENST00000433189 144 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AL161651.1-201ENST00000440882 223 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM13O60858 AL031737.1-201ENST00000450125 223 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM13O60858 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM13O60858 Y_RNA.677-201ENST00000516401 85 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 RNU6-1061P-201ENST00000516530 99 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 RNU6-344P-201ENST00000516635 111 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 ACA59.2-201ENST00000517061 156 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 MIR3136-201ENST00000583498 78 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms