Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SORBS3O60504 Y_RNA.217-201ENST00000364214 105 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 RNY4P28-201ENST00000365281 93 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 SNORA54-201ENST00000384281 123 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 SNORA44-201ENST00000384584 132 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 AL357139.1-201ENST00000407792 426 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
SORBS3O60504 Y_RNA.641-201ENST00000459414 105 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 COX6CP14-201ENST00000469580 174 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 MIR3684-201ENST00000579779 74 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 AL355297.2-201ENST00000604792 129 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 AC098479.1-201ENST00000609225 154 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 SCARNA15.3-201ENST00000626315 122 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 SCARNA4.1-201ENST00000628597 123 ntBASIC3.53□□□□□ -1.84
SORBS3O60504 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.52□□□□□ -1.85
SORBS3O60504 MIR411-201ENST00000362239 96 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 RNU1-23P-201ENST00000363361 144 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 RNU6-975P-201ENST00000384296 105 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 Y_RNA.626-201ENST00000411288 95 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 PIGPP3-201ENST00000425307 415 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 AC022018.1-201ENST00000430685 241 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.52□□□□□ -1.85
SORBS3O60504 RNA5SP490-201ENST00000517141 136 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 MIR3117-201ENST00000584034 78 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 snoZ196.1-201ENST00000625269 89 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SORBS3O60504 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.52□□□□□ -1.85
SORBS3O60504 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SORBS3O60504 AC138915.1-201ENST00000565427 1685 ntBASIC3.52□□□□□ -1.85
SORBS3O60504 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.52□□□□□ -1.85
SORBS3O60504 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SORBS3O60504 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
SORBS3O60504 RNU6-743P-201ENST00000364151 106 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 SNORA7.4-201ENST00000384249 137 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 RNU6-710P-201ENST00000410424 105 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 HMGN2P18-201ENST00000450680 270 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 EEF1B2P7-201ENST00000451177 676 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 SUMO1P2-201ENST00000452524 304 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 PRELID3BP1-201ENST00000457142 540 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 AC016925.1-201ENST00000458303 298 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 SNORD2.1-201ENST00000458762 69 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 SNORA64.4-201ENST00000516632 81 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.51□□□□□ -1.85
SORBS3O60504 AC009127.3-201ENST00000570531 403 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 AC073349.3-201ENST00000617616 186 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 MIR6852-201ENST00000621699 66 ntBASIC3.51□□□□□ -1.85
SORBS3O60504 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SORBS3O60504 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SORBS3O60504 RNA5SP383-201ENST00000362934 120 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 RNU6-209P-201ENST00000384118 107 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 SNORD14D-201ENST00000384390 87 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 Y_RNA.793-201ENST00000411222 111 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 RNU6-57P-201ENST00000411348 103 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 Y_RNA.644-201ENST00000459006 113 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 Y_RNA.674-201ENST00000516362 113 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 RNU6-948P-201ENST00000516374 107 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 AC024405.2-202ENST00000532731 184 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 AC073476.4-201ENST00000628409 72 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 SNORA50A-202ENST00000629536 136 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 snoU18.1-201ENST00000629629 71 ntBASIC3.5□□□□□ -1.85
SORBS3O60504 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SORBS3O60504 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SORBS3O60504 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.5□□□□□ -1.85
SORBS3O60504 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.49□□□□□ -1.85
SORBS3O60504 SNORA80A-201ENST00000363922 136 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 SNORD15B-201ENST00000384714 146 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 BTF3P11-201ENST00000426582 477 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.49□□□□□ -1.85
SORBS3O60504 AC016717.1-201ENST00000448918 286 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.49□□□□□ -1.85
SORBS3O60504 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.49□□□□□ -1.85
SORBS3O60504 SNORA70.12-201ENST00000516084 153 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.49□□□□□ -1.85
SORBS3O60504 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.49□□□□□ -1.85
SORBS3O60504 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.49□□□□□ -1.85
SORBS3O60504 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 AC004792.1-201ENST00000614523 137 ntBASIC3.49□□□□□ -1.85
SORBS3O60504 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
SORBS3O60504 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SORBS3O60504 AC009487.4-201ENST00000624969 3585 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
SORBS3O60504 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SORBS3O60504 RNU6-1272P-201ENST00000362776 107 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 SNORA71.1-201ENST00000364523 117 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 MIR561-201ENST00000385216 97 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 MIR548I3-201ENST00000408378 149 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 MIR548I1-201ENST00000408810 149 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 AC003685.2-201ENST00000422795 395 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.48□□□□□ -1.85
SORBS3O60504 RNU6-221P-201ENST00000459541 99 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.48□□□□□ -1.85
SORBS3O60504 AC091826.1-201ENST00000514065 313 ntBASIC3.48□□□□□ -1.85
SORBS3O60504 RN7SKP40-201ENST00000517211 242 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms