Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LDB2O43679 MTND5P35-201ENST00000557537 1720 ntBASIC2.34□□□□□ -2.04
LDB2O43679 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
LDB2O43679 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.33□□□□□ -2.04
LDB2O43679 RNU6-770P-201ENST00000363929 105 ntBASIC2.33□□□□□ -2.04
LDB2O43679 SNORA18.2-201ENST00000383865 132 ntBASIC2.33□□□□□ -2.04
LDB2O43679 RNU6-26P-201ENST00000383985 107 ntBASIC2.33□□□□□ -2.04
LDB2O43679 RNU6-926P-201ENST00000384075 107 ntBASIC2.33□□□□□ -2.04
LDB2O43679 RNU6-713P-201ENST00000384761 107 ntBASIC2.33□□□□□ -2.04
LDB2O43679 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
LDB2O43679 AC004386.2-201ENST00000441858 148 ntBASIC2.33□□□□□ -2.04
LDB2O43679 DYNLT3P2-201ENST00000442517 295 ntBASIC2.33□□□□□ -2.04
LDB2O43679 AC010095.1-201ENST00000443543 144 ntBASIC2.33□□□□□ -2.04
LDB2O43679 AC009237.7-201ENST00000447357 229 ntBASIC2.33□□□□□ -2.04
LDB2O43679 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.33□□□□□ -2.04
LDB2O43679 AC091179.3-201ENST00000474761 144 ntBASIC2.33□□□□□ -2.04
LDB2O43679 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
LDB2O43679 RNY3P15-201ENST00000516297 97 ntBASIC2.33□□□□□ -2.04
LDB2O43679 RNU6-344P-201ENST00000516635 111 ntBASIC2.33□□□□□ -2.04
LDB2O43679 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.33□□□□□ -2.04
LDB2O43679 MIR4503-201ENST00000582187 83 ntBASIC2.33□□□□□ -2.04
LDB2O43679 MIR5739-201ENST00000619803 80 ntBASIC2.33□□□□□ -2.04
LDB2O43679 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
LDB2O43679 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LDB2O43679 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LDB2O43679 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LDB2O43679 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.33□□□□□ -2.04
LDB2O43679 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
LDB2O43679 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB2O43679 Y_RNA.19-201ENST00000362462 99 ntBASIC2.32□□□□□ -2.04
LDB2O43679 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
LDB2O43679 Y_RNA.452-201ENST00000384202 108 ntBASIC2.32□□□□□ -2.04
LDB2O43679 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AL079342.1-201ENST00000401460 267 ntBASIC2.32□□□□□ -2.04
LDB2O43679 MIR1261-201ENST00000408659 82 ntBASIC2.32□□□□□ -2.04
LDB2O43679 RNU4-53P-201ENST00000410828 140 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.32□□□□□ -2.04
LDB2O43679 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
LDB2O43679 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
LDB2O43679 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.32□□□□□ -2.04
LDB2O43679 RPL26P26-201ENST00000480251 434 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AC025465.3-201ENST00000510570 311 ntBASIC2.32□□□□□ -2.04
LDB2O43679 SNORA40.9-201ENST00000515895 93 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AC018630.3-201ENST00000542637 96 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AL161670.1-201ENST00000554348 137 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AC023824.2-201ENST00000566185 400 ntBASIC2.32□□□□□ -2.04
LDB2O43679 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
LDB2O43679 MZT1P2-201ENST00000604387 248 ntBASIC2.32□□□□□ -2.04
LDB2O43679 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.32□□□□□ -2.04
LDB2O43679 Z82209.1-201ENST00000422141 2135 ntBASIC2.32□□□□□ -2.04
LDB2O43679 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LDB2O43679 RNU6-944P-201ENST00000364023 107 ntBASIC2.31□□□□□ -2.04
LDB2O43679 RNU6-574P-201ENST00000384265 107 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR95-201ENST00000385072 81 ntBASIC2.31□□□□□ -2.04
LDB2O43679 RNU6-220P-201ENST00000390919 107 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR1294-201ENST00000408503 142 ntBASIC2.31□□□□□ -2.04
LDB2O43679 AC004866.1-201ENST00000411748 78 ntBASIC2.31□□□□□ -2.04
LDB2O43679 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.31□□□□□ -2.04
LDB2O43679 IFNA11P-201ENST00000446352 526 ntBASIC2.31□□□□□ -2.04
LDB2O43679 PCNPP5-201ENST00000452246 481 ntBASIC2.31□□□□□ -2.04
LDB2O43679 CYP2C59P-201ENST00000457790 269 ntBASIC2.31□□□□□ -2.04
LDB2O43679 AC074133.1-201ENST00000515696 183 ntBASIC2.31□□□□□ -2.04
LDB2O43679 RNU2-44P-201ENST00000516795 194 ntBASIC2.31□□□□□ -2.04
LDB2O43679 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.31□□□□□ -2.04
LDB2O43679 AC233702.2-202ENST00000562547 291 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MYL12BP1-201ENST00000569826 507 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR5194-201ENST00000582634 120 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR3124-201ENST00000582636 67 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR5006-201ENST00000583027 110 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR3149-201ENST00000584629 83 ntBASIC2.31□□□□□ -2.04
LDB2O43679 AL356280.1-201ENST00000603614 379 ntBASIC2.31□□□□□ -2.04
LDB2O43679 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
LDB2O43679 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.31□□□□□ -2.04
LDB2O43679 AL357075.2-201ENST00000614906 189 ntBASIC2.31□□□□□ -2.04
LDB2O43679 U4.1-201ENST00000620349 87 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR8062-201ENST00000621515 85 ntBASIC2.31□□□□□ -2.04
LDB2O43679 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
LDB2O43679 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.31□□□□□ -2.04
LDB2O43679 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LDB2O43679 RNU6-806P-201ENST00000365147 105 ntBASIC2.3□□□□□ -2.04
LDB2O43679 RNU1-138P-201ENST00000384093 164 ntBASIC2.3□□□□□ -2.04
LDB2O43679 Y_RNA.512-201ENST00000384518 102 ntBASIC2.3□□□□□ -2.04
LDB2O43679 Y_RNA.556-201ENST00000384677 113 ntBASIC2.3□□□□□ -2.04
LDB2O43679 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB2O43679 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB2O43679 AL161788.1-201ENST00000441805 169 ntBASIC2.3□□□□□ -2.04
LDB2O43679 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
LDB2O43679 UQCRBP2-201ENST00000447827 297 ntBASIC2.3□□□□□ -2.04
LDB2O43679 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB2O43679 LINC01399-202ENST00000458450 244 ntBASIC2.3□□□□□ -2.04
LDB2O43679 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
LDB2O43679 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB2O43679 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.3□□□□□ -2.04
LDB2O43679 AC004817.2-201ENST00000561794 651 ntBASIC2.3□□□□□ -2.04
LDB2O43679 AC136932.1-201ENST00000574771 208 ntBASIC2.3□□□□□ -2.04
LDB2O43679 SNORD11B-201ENST00000607707 90 ntBASIC2.3□□□□□ -2.04
LDB2O43679 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.3□□□□□ -2.04
LDB2O43679 MIR376A1-201ENST00000616574 68 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms