Protein–RNA interactions for Protein: A7XYQ1

SOBP, Sine oculis-binding protein homolog, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOBPA7XYQ1 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AC007064.1-201ENST00000412238 351 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AC023449.1-201ENST00000454464 154 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 RNA5SP367-201ENST00000516557 118 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 AC007656.2-201ENST00000624902 4547 ntBASIC4.09□□□□□ -1.75
SOBPA7XYQ1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOBPA7XYQ1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SOBPA7XYQ1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SOBPA7XYQ1 ZNF720P1-201ENST00000562403 1939 ntBASIC4.09□□□□□ -1.76
SOBPA7XYQ1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SOBPA7XYQ1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.09□□□□□ -1.76
SOBPA7XYQ1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 RNU6-301P-201ENST00000384277 107 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 MIR562-201ENST00000384894 95 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 Z98941.1-201ENST00000407764 100 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AC018634.1-201ENST00000437554 401 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AC005921.1-201ENST00000510589 286 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AC105137.2-201ENST00000569073 466 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SOBPA7XYQ1 FAM35BP-202ENST00000497389 3337 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 AL133412.1-201ENST00000380194 2992 ntBASIC4.08□□□□□ -1.76
SOBPA7XYQ1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AL136964.1-201ENST00000622038 2990 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.107-201ENST00000363190 121 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.366-201ENST00000365540 102 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 NDUFB4P6-201ENST00000436819 366 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AC139453.2-201ENST00000487255 133 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AC093663.1-201ENST00000497190 394 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 MIR5187-201ENST00000583479 76 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 RNU6-91P-201ENST00000607774 107 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 AC107294.3-201ENST00000609211 526 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.07□□□□□ -1.76
SOBPA7XYQ1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.07□□□□□ -1.76
SOBPA7XYQ1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 RNU6-1010P-201ENST00000362757 107 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 SNORA48.2-201ENST00000390926 124 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 RHEBP3-201ENST00000411920 351 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 AC245102.2-201ENST00000448956 180 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 AL133162.1-201ENST00000463228 453 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 RPL27AP5-201ENST00000469428 449 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 AC022137.1-201ENST00000483735 151 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 RNA5SP490-201ENST00000517141 136 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 AC084364.2-201ENST00000546924 395 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 U6.105-201ENST00000637379 88 ntBASIC4.06□□□□□ -1.76
SOBPA7XYQ1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SOBPA7XYQ1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.510-201ENST00000384511 114 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 RNVU1-14-201ENST00000384770 164 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 AC063976.3-201ENST00000426849 329 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 HMGN2P31-201ENST00000432430 273 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 RPS3P1-201ENST00000456781 192 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 AC010598.1-201ENST00000510378 103 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms