Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 RNU1-40P-201ENST00000516816 164 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 RNU1-97P-201ENST00000516872 164 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 Y_RNA.718-201ENST00000517110 102 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 AC022868.1-201ENST00000517767 391 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 AC093023.1-201ENST00000547375 507 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 MIR3169-201ENST00000578032 83 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 MIR4795-201ENST00000584182 89 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 AL078596.1-201ENST00000624856 447 ntBASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
NKX6-3A6NJ46 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU4-73P-201ENST00000363164 141 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 Y_RNA.179-201ENST00000363844 90 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-280P-201ENST00000364145 104 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 Y_RNA.364-201ENST00000365532 101 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-245P-201ENST00000384020 107 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-793P-201ENST00000384233 104 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 Y_RNA.557-201ENST00000384680 107 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNA5SP504-201ENST00000410676 117 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-1001P-201ENST00000411265 100 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-57P-201ENST00000411348 103 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 MTCO1P44-201ENST00000441935 243 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 snoU13.15-201ENST00000459407 104 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU7-57P-201ENST00000459540 60 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 AC025033.1-201ENST00000463883 194 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-470P-201ENST00000515954 104 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-1114P-201ENST00000516022 107 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-1041P-201ENST00000516254 102 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNU6-107P-201ENST00000516643 102 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 CYP2C61P-201ENST00000604072 290 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 SNORD11B-201ENST00000607707 90 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 AC006001.4-201ENST00000622243 395 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 MIR219B-201ENST00000637023 88 ntBASIC1.73□□□□□ -2.13
NKX6-3A6NJ46 RNA5SP361-201ENST00000362686 118 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 RNA5SP465-201ENST00000391195 109 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 HMGN2P19-201ENST00000425149 265 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 AL353689.1-201ENST00000438895 199 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 MTND3P22-201ENST00000510932 243 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 RNVU1-2-201ENST00000516326 135 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 AC010999.1-201ENST00000611856 324 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 AC133104.2-201ENST00000615272 193 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
NKX6-3A6NJ46 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.13
NKX6-3A6NJ46 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 RNU5E-4P-201ENST00000364931 120 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 RNU6-867P-201ENST00000364956 107 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 RNU6-281P-201ENST00000384212 103 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 SNORA64-201ENST00000384674 134 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 RNU6-1156P-201ENST00000410365 100 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 MTCO2P27-201ENST00000420740 428 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 MRPS18CP6-201ENST00000423587 223 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 snoU13.26-201ENST00000459452 105 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC114982.1-201ENST00000469402 321 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 FGF7P4-201ENST00000509595 295 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 RNU6-344P-201ENST00000516635 111 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC087441.2-201ENST00000529141 262 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC090617.3-201ENST00000573670 475 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AC125232.2-201ENST00000592457 143 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 MTND5P35-201ENST00000557537 1720 ntBASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.71□□□□□ -2.14
NKX6-3A6NJ46 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 RNU1-62P-201ENST00000362599 164 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 SNORD114-1-201ENST00000362705 72 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.314-201ENST00000365114 102 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 RNU6-975P-201ENST00000384296 105 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 SNORA67.2-201ENST00000384300 149 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 MIR586-201ENST00000385035 97 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 MIR548B-201ENST00000385247 97 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 AC060773.1-201ENST00000421698 310 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 AC096644.2-201ENST00000429278 159 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 SNORD19B-201ENST00000459623 84 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 RNU6-948P-201ENST00000516374 107 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms