Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 RNU4-30P-201ENST00000410245 143 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 RAB28P5-201ENST00000427490 651 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC080013.2-201ENST00000460866 323 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC107222.1-201ENST00000510899 637 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 MTND1P19-201ENST00000511780 315 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 RNU6-1023P-201ENST00000516137 106 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 RNU6-586P-201ENST00000517265 104 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC127459.3-201ENST00000624328 466 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC068205.3-201ENST00000636385 468 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 AC080128.1-201ENST00000474389 1917 ntBASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPDC1A2A3K4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.16-201ENST00000362421 102 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 MIR548H3-201ENST00000408771 118 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RPL23AP36-201ENST00000413895 458 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RN7SL429P-201ENST00000479090 223 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RN7SL489P-201ENST00000486185 223 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RN7SL327P-201ENST00000488659 223 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RNU6-388P-201ENST00000517012 105 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RNU6-389P-201ENST00000517048 105 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 MIR3668-201ENST00000582138 75 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 AC005357.1-201ENST00000588399 301 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 RN7SL853P-201ENST00000617250 223 ntBASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPDC1A2A3K4 SNORA20.1-201ENST00000364790 130 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 SNORA72.2-201ENST00000365028 127 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 RNA5SP126-201ENST00000365092 109 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.477-201ENST00000384352 108 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 MIR1294-201ENST00000408503 142 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 MTND4LP30-201ENST00000454092 297 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 RNU6-56P-201ENST00000516986 93 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 AC022441.3-201ENST00000605737 136 ntBASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PTPDC1A2A3K4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 MIR410-201ENST00000362222 80 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 RNU4-82P-201ENST00000362443 140 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.60-201ENST00000362831 98 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 RNU6-944P-201ENST00000364023 107 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 Y_RNA.416-201ENST00000384014 113 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 AC023141.11-201ENST00000508864 202 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 RNU1-117P-201ENST00000517041 158 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 AC055872.1-201ENST00000570978 278 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 MIR5739-201ENST00000619803 80 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 MIR3674-201ENST00000636576 68 ntBASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPDC1A2A3K4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.09□□□□□ -1.92
PTPDC1A2A3K4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 SNORD87-201ENST00000364849 89 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 Y_RNA.352-201ENST00000365439 102 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 SNORA67.2-201ENST00000384300 149 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 Y_RNA.552-201ENST00000384665 112 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNA5SP210-201ENST00000391034 120 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 SNORA53-201ENST00000391141 249 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNA5SP475-201ENST00000410568 110 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNA5SP504-201ENST00000410676 117 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 HMGB3P17-201ENST00000504195 649 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 AC096725.1-201ENST00000514266 313 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 SERF1AP1-201ENST00000514575 187 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 Y_RNA.673-201ENST00000516306 88 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNU6-107P-201ENST00000516643 102 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 AC018630.3-201ENST00000542637 96 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 AC004467.1-201ENST00000615678 330 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 AC006001.4-201ENST00000622243 395 ntBASIC3.08□□□□□ -1.92
PTPDC1A2A3K4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPDC1A2A3K4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
PTPDC1A2A3K4 Y_RNA.257-201ENST00000364596 102 ntBASIC3.07□□□□□ -1.92
PTPDC1A2A3K4 RNU6-326P-201ENST00000365480 107 ntBASIC3.07□□□□□ -1.92
PTPDC1A2A3K4 Y_RNA.569-201ENST00000384749 103 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms