Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RNU5B-2P-201ENST00000363036 113 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 RNU4-38P-201ENST00000364472 129 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 RNU6-534P-201ENST00000364877 106 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 RNU6-1103P-201ENST00000384150 107 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 SNORA75-201ENST00000384158 137 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 RNU6-1105P-201ENST00000384774 107 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CLRN2A0PK11 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.2□□□□□ -2.22
CLRN2A0PK11 TIMM9P3-201ENST00000428659 274 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.2□□□□□ -2.22
CLRN2A0PK11 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.2□□□□□ -2.22
CLRN2A0PK11 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 HMGN1P12-201ENST00000499125 195 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 RN7SKP49-201ENST00000516675 260 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 MIR5000-201ENST00000577717 103 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 MIR5692C1-201ENST00000585309 91 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 SNRPGP20-201ENST00000604477 205 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 AC103705.1-201ENST00000619013 241 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.2□□□□□ -2.22
CLRN2A0PK11 OR5AK4P-201ENST00000635912 903 ntBASIC1.2□□□□□ -2.22
CLRN2A0PK11 RNU6-1123P-201ENST00000362347 106 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 Y_RNA.409-201ENST00000383990 98 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNU6-214P-201ENST00000384130 107 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNY3P9-201ENST00000384727 106 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 MIR320B2-201ENST00000408479 138 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNU6-325P-201ENST00000411132 105 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.19□□□□□ -2.22
CLRN2A0PK11 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.19□□□□□ -2.22
CLRN2A0PK11 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.19□□□□□ -2.22
CLRN2A0PK11 AC009237.7-201ENST00000447357 229 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.19□□□□□ -2.22
CLRN2A0PK11 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNU6-1069P-201ENST00000516612 133 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNU6-1332P-201ENST00000516666 104 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNU1-117P-201ENST00000517041 158 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 MTND1P35-201ENST00000526739 508 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLRN2A0PK11 AC007834.2-201ENST00000536310 343 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 AL157687.1-201ENST00000554853 619 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 AL118558.2-201ENST00000556294 238 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.19□□□□□ -2.22
CLRN2A0PK11 AC139792.3-201ENST00000623525 224 ntBASIC1.19□□□□□ -2.22
CLRN2A0PK11 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLRN2A0PK11 RNU6-82P-201ENST00000363970 107 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 Y_RNA.359-201ENST00000365498 102 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 RNA5SP467-201ENST00000391274 118 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 RNU1-139P-201ENST00000391307 165 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
CLRN2A0PK11 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.18□□□□□ -2.22
CLRN2A0PK11 RNU7-57P-201ENST00000459540 60 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 HMGB1P29-201ENST00000505659 499 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 SNORA40.12-201ENST00000516329 111 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CLRN2A0PK11 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.18□□□□□ -2.22
CLRN2A0PK11 SCOCP1-201ENST00000554676 349 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 MTND3P12-201ENST00000559068 328 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 MIR3664-201ENST00000579074 99 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 FGF7P1-201ENST00000582820 288 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.18□□□□□ -2.22
CLRN2A0PK11 MTND4P5-201ENST00000435821 1374 ntBASIC1.18□□□□□ -2.22
CLRN2A0PK11 ZNF204P-201ENST00000416749 2397 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 RNU6-38P-201ENST00000384085 107 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 RNU6-950P-201ENST00000384651 107 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CLRN2A0PK11 RNA5SP109-201ENST00000391010 116 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 RPS26P42-201ENST00000413485 326 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.17□□□□□ -2.22
CLRN2A0PK11 AL445305.1-201ENST00000432577 575 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AL359672.1-201ENST00000442302 409 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AC103851.1-201ENST00000506833 274 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 OSBPL9P5-201ENST00000542581 171 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.17□□□□□ -2.22
CLRN2A0PK11 AC006362.1-201ENST00000567392 174 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AC005730.3-201ENST00000583067 366 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AC146944.4-201ENST00000602697 718 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AC004492.1-201ENST00000607036 742 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 AL078596.1-201ENST00000624856 447 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 ELL2P3-201ENST00000457883 1602 ntBASIC1.17□□□□□ -2.22
CLRN2A0PK11 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLRN2A0PK11 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 AC004866.1-201ENST00000411748 78 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 MTCO1P19-201ENST00000443487 500 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 RPS27P1-201ENST00000450552 247 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 HSPE1P13-201ENST00000451143 297 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 AF186996.7-201ENST00000492781 209 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 SUMO2P16-201ENST00000519475 264 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 AC024995.1-201ENST00000523014 93 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.16□□□□□ -2.22
CLRN2A0PK11 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.16□□□□□ -2.22
CLRN2A0PK11 RN7SL793P-201ENST00000583259 296 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
CLRN2A0PK11 AC092807.2-201ENST00000609367 243 ntBASIC1.16□□□□□ -2.22
CLRN2A0PK11 SNORA69-201ENST00000383895 132 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 MIR487A-201ENST00000385009 80 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms