Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC103996.1-201ENST00000555468 102 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC026470.2-201ENST00000561492 181 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC008507.2-201ENST00000588402 1176 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AL008636.1-201ENST00000625038 1018 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 RNU4-1-201ENST00000363925 141 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 SNORA75.6-201ENST00000391318 127 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 RPL37P21-201ENST00000435890 276 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AL392103.1-201ENST00000447000 198 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC074290.1-201ENST00000448883 135 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC116353.3-201ENST00000511215 249 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 RNU11-2P-201ENST00000516898 142 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 RNA5SP94-201ENST00000516917 108 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 RNU1-117P-201ENST00000517041 158 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AP001372.4-201ENST00000524889 472 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 MIR4305-201ENST00000583252 102 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC010620.1-201ENST00000601088 1102 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC121334.2-201ENST00000605387 271 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC099786.3-201ENST00000565735 1410 ntBASIC-0.32□□□□□ -2.46
TCRBV3S1A0A5B6 AC027514.1-201ENST00000588561 1603 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-137P-201ENST00000363680 108 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 MTCYBP36-201ENST00000404146 440 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 RNU2-39P-201ENST00000410604 198 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 FRG2DP-202ENST00000566967 323 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AC068790.2-201ENST00000602601 557 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AL512427.1-201ENST00000618593 349 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AC008873.1-201ENST00000625051 138 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 AC019226.2-201ENST00000625973 424 ntBASIC-0.33□□□□□ -2.46
TCRBV3S1A0A5B6 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 SNORD114-26-201ENST00000363543 72 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-514P-201ENST00000384208 107 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 MIR558-201ENST00000384920 94 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 ERHP2-201ENST00000402323 299 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 RNU2-8P-201ENST00000410727 190 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AL590632.1-201ENST00000424289 371 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AC007327.1-201ENST00000447461 264 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AC092989.1-201ENST00000481235 277 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 RPL23AP54-201ENST00000495129 419 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AP003072.2-201ENST00000527756 676 ntBASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.34□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-222P-201ENST00000362438 107 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-827P-201ENST00000365553 106 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-413P-201ENST00000384115 107 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 SNORA8.2-201ENST00000384372 139 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 RNA5SP95-201ENST00000410319 137 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 HSFY5P-201ENST00000453726 309 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 SNORA40.12-201ENST00000516329 111 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 RNU7-28P-201ENST00000516759 62 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 MTATP6P25-201ENST00000574491 261 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 AP000907.4-201ENST00000604143 237 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 AL121895.2-201ENST00000619558 447 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 AL078596.1-201ENST00000624856 447 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 AL163152.1-201ENST00000642001 374 ntBASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
TCRBV3S1A0A5B6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 SNORA2B-201ENST00000384583 137 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 MIR644A-201ENST00000385262 94 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 AC023157.2-201ENST00000540596 141 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 MIR548AO-201ENST00000579992 96 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 AC013244.3-201ENST00000605614 388 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 MIR6515-201ENST00000619843 57 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 AC073544.1-201ENST00000600110 1595 ntBASIC-0.36□□□□□ -2.47
TCRBV3S1A0A5B6 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-833P-201ENST00000363486 107 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-756P-201ENST00000383997 107 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 PCNPP3-201ENST00000393579 471 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AL136310.1-201ENST00000404926 654 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 RPS26P42-201ENST00000413485 326 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AL353997.1-201ENST00000432936 108 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 RNA5SP454-201ENST00000517231 127 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms