Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AL031274.1-201ENST00000450334 232 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNU7-94P-201ENST00000459576 63 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RPS29P27-201ENST00000463711 170 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC010493.1-201ENST00000513479 292 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNU7-99P-201ENST00000516271 62 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-1110P-201ENST00000516462 101 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-410P-201ENST00000517006 107 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC022868.1-201ENST00000517767 391 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC087854.1-201ENST00000519706 414 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC027419.1-201ENST00000522976 328 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC002044.1-201ENST00000606707 158 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC097065.2-201ENST00000608159 533 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 MIR6779-201ENST00000617283 64 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 U6.73-201ENST00000619194 103 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TRAV3A0A0B4J244 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 SNORD113-6-201ENST00000363345 75 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-266P-201ENST00000364225 107 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-1127P-201ENST00000384580 107 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 SNORD99-201ENST00000408612 74 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AC104850.1-201ENST00000435940 476 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AC005002.2-201ENST00000438228 269 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AC079781.2-201ENST00000446424 169 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 MTCO3P8-201ENST00000453691 755 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 snoU13.6-201ENST00000458785 104 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-947P-201ENST00000516264 106 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AGGF1P4-201ENST00000568249 801 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 MIR4778-201ENST00000577635 80 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 BNIP3P39-201ENST00000601077 554 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 Z83818.1-201ENST00000603584 150 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AC025449.1-201ENST00000603896 529 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 SNORA28-201ENST00000606769 126 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AL157392.4-201ENST00000609756 345 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 AL096861.1-201ENST00000610899 123 ntBASIC0.2□□□□□ -2.38
TRAV3A0A0B4J244 MTND5P16-201ENST00000460269 1703 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-906P-201ENST00000384700 70 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 SNORA40.4-201ENST00000390971 128 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 MTCYBP10-201ENST00000424905 650 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RPL23AP50-201ENST00000434149 455 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RNU7-182P-201ENST00000459009 62 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AC025465.4-201ENST00000513422 638 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-344P-201ENST00000516635 111 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RNU2-46P-201ENST00000517038 113 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-323P-201ENST00000521915 107 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 RSL24D1P11-201ENST00000591045 491 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AL138726.1-201ENST00000614873 333 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AC107308.1-201ENST00000615897 301 ntBASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV3A0A0B4J244 AP000568.1-201ENST00000282964 442 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-1305P-201ENST00000364353 104 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 RNU5E-5P-201ENST00000365379 116 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-108P-201ENST00000365558 107 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 SNORD70.1-201ENST00000391007 85 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 MRPS18CP6-201ENST00000423587 223 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 MTCO1P19-201ENST00000443487 500 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 EPS15P1-201ENST00000448836 336 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 MTATP6P14-201ENST00000455189 673 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 TPT1P7-201ENST00000458300 517 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 Vault.3-201ENST00000516676 95 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AC131055.1-201ENST00000584626 316 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AP000907.4-201ENST00000604143 237 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AC092354.1-201ENST00000606057 376 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 AL049777.1-201ENST00000622740 518 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 SEPT14P19-203ENST00000633205 211 ntBASIC0.18□□□□□ -2.38
TRAV3A0A0B4J244 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-1097P-201ENST00000363586 107 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-1029P-201ENST00000384109 107 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 RNU6-1067P-201ENST00000384752 107 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 RNA5SP504-201ENST00000410676 117 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 RPS3AP3-201ENST00000411933 242 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 USP9YP12-201ENST00000450481 570 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 NDUFB4P10-201ENST00000452541 359 ntBASIC0.17□□□□□ -2.38
TRAV3A0A0B4J244 LINC01399-202ENST00000458450 244 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms