Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RNA5SP504-201ENST00000410676 117 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 NDUFB4P10-201ENST00000452541 359 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 SNORD2.1-201ENST00000458762 69 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 AC091826.1-201ENST00000514065 313 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-155P-201ENST00000516347 100 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 RNU2-44P-201ENST00000516795 194 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 MIR5006-201ENST00000583027 110 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 ELOCP29-201ENST00000588193 334 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 Z83818.1-201ENST00000603584 150 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 AC068205.3-201ENST00000636385 468 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 AL365361.1-201ENST00000566942 3481 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 RNU7-120P-201ENST00000459334 63 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-191P-201ENST00000516295 94 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 AC024405.2-202ENST00000532731 184 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 MIR4513-201ENST00000581077 86 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 AC110079.1-202ENST00000635213 138 ntBASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA2Q9Y5H9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 RNU4-80P-201ENST00000363200 141 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC104332.1-201ENST00000440471 797 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 RPL31P41-201ENST00000477967 372 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 HSPE1P18-201ENST00000517602 280 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AP002392.1-201ENST00000537692 208 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 GTF3AP2-201ENST00000557014 266 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 MIR4765-201ENST00000585007 77 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 RPL17P51-201ENST00000605218 238 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC091152.2-201ENST00000591628 2569 ntBASIC3.26□□□□□ -1.89
PCDHA2Q9Y5H9 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 AC093010.3-201ENST00000570269 15214 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-454P-201ENST00000364292 107 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 SNORD32B-201ENST00000364460 84 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-662P-201ENST00000384253 104 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 SNORA67.2-201ENST00000384300 149 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 SNORA12-201ENST00000391162 147 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 PCNPP3-201ENST00000393579 471 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 MTND2P29-201ENST00000438595 412 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 AC107393.1-201ENST00000512403 346 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNA5SP112-201ENST00000515937 99 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNA5SP356-201ENST00000515972 94 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-107P-201ENST00000516643 102 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNU2-12P-201ENST00000517216 168 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 AC103810.1-201ENST00000579873 453 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 MIR3145-201ENST00000580727 82 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RPL30P11-203ENST00000598995 310 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 AC006380.1-201ENST00000603598 186 ntBASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA2Q9Y5H9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 SNORD87-201ENST00000364849 89 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 AL139281.1-201ENST00000422120 335 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 MIR4672-201ENST00000583126 81 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 DEFB117-201ENST00000602356 141 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 AC006023.1-201ENST00000603944 259 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 AC073349.3-201ENST00000617616 186 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 UCA1.1-201ENST00000620952 75 ntBASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms