Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNA5SP447-201ENST00000363749 119 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU6-887P-201ENST00000410660 100 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 RPL23AP46-201ENST00000438548 490 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 RN7SL41P-201ENST00000476144 297 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 RN7SKP289-201ENST00000517244 295 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR203B-201ENST00000636080 86 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 AC006160.2-201ENST00000637708 154 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 AC027290.2-201ENST00000623210 18662 ntBASIC4.56□□□□□ -1.68
PCDHGA4Q9Y5G9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD115-19-201ENST00000363098 82 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD115-18-201ENST00000363293 82 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD115-17-201ENST00000364612 82 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU6-438P-201ENST00000365561 103 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR802-201ENST00000390235 94 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU1-82P-201ENST00000390851 165 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 AC097463.2-201ENST00000421074 142 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 AL732292.1-201ENST00000426692 226 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 RPS12P18-201ENST00000442381 270 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU7-23P-201ENST00000459465 62 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 AC073413.2-201ENST00000604332 360 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 AC110741.2-201ENST00000605278 268 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR1255B1-201ENST00000636325 63 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 AC012442.3-202ENST00000636742 206 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 DHX9P1-201ENST00000436565 3076 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 AC107068.1-201ENST00000563286 4218 ntBASIC4.55□□□□□ -1.68
PCDHGA4Q9Y5G9 MAPK10-320ENST00000641462 6696 ntBASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 Y_RNA.37-201ENST00000362606 108 ntBASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU4-67P-201ENST00000364569 141 ntBASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 Y_RNA.611-201ENST00000410682 108 ntBASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR3160-1-201ENST00000577972 85 ntBASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR3690-201ENST00000580266 75 ntBASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDHGA4Q9Y5G9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR126-201ENST00000362291 85 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 Y_RNA.95-201ENST00000363079 95 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD115-28-201ENST00000363931 81 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 SNORD38C-201ENST00000384381 69 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR605-201ENST00000385078 83 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU11-5P-201ENST00000391216 129 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 HMGN2P8-201ENST00000391458 268 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 AL138878.1-201ENST00000405131 347 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 RN7SKP177-201ENST00000410567 355 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 RNU7-80P-201ENST00000459562 61 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 AC026402.1-201ENST00000513642 170 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 YPEL5P2-201ENST00000605553 359 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 AC090115.4-201ENST00000609970 188 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 MIR6716-201ENST00000613413 80 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 AC091304.10-201ENST00000641554 121 ntBASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA4Q9Y5G9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 AC139713.2-215ENST00000641428 5037 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 MFSD8-236ENST00000641509 4050 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORA14A-201ENST00000364773 135 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.440-201ENST00000384120 114 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 RNA5SP397-201ENST00000391323 118 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR889-201ENST00000401280 79 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR1253-201ENST00000408273 105 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms