Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGB6Q9Y5F9 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
PCDHGB6Q9Y5F9 MZT1P2-201ENST00000604387 248 ntBASIC2.61□□□□□ -1.99
PCDHGB6Q9Y5F9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.61□□□□□ -1.99
PCDHGB6Q9Y5F9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-545P-201ENST00000362681 104 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 RNA5SP361-201ENST00000362686 118 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SNORA22B-201ENST00000383876 138 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-308P-201ENST00000390957 107 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SNORD78.2-201ENST00000391076 69 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SDAD1P3-201ENST00000427380 333 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 AL139109.1-201ENST00000455491 297 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 AC067942.3-201ENST00000512025 362 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 MIR4524B-201ENST00000581569 115 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 MIR4769-201ENST00000584126 77 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SNORD14A-201ENST00000606526 91 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHGB6Q9Y5F9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-160P-201ENST00000384591 107 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 MRPL35P1-201ENST00000404272 572 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 AC096644.2-201ENST00000429278 159 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 MTCO1P44-201ENST00000441935 243 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 FCF1P4-201ENST00000448326 183 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 PCNPP5-201ENST00000452246 481 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-948P-201ENST00000516374 107 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 RNU6-1153P-201ENST00000516760 105 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 HSBP1P1-201ENST00000555205 166 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 AL031274.2-201ENST00000599419 203 ntBASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.59□□□□□ -1.99
PCDHGB6Q9Y5F9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.59□□□□□ -2
PCDHGB6Q9Y5F9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 MIR410-201ENST00000362222 80 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 SNORA70B-201ENST00000384210 135 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 MRPL42P3-201ENST00000401492 326 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 SNORD12B-201ENST00000410433 91 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 RNA5SP21-201ENST00000410917 96 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 UQCRBP2-201ENST00000447827 297 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 RNU6-498P-201ENST00000459468 107 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 AC022616.4-201ENST00000522985 181 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 AC007336.1-201ENST00000576365 3828 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 AC010205.1-201ENST00000616668 449 ntBASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHGB6Q9Y5F9 SNORA63-201ENST00000363450 132 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 RNU4-50P-201ENST00000364361 141 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 SNORA63.7-201ENST00000365579 123 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 TOMM22P2-201ENST00000430735 237 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 AC010531.2-201ENST00000465012 153 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 RNU1-117P-201ENST00000517041 158 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 RPS29P30-201ENST00000600975 111 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 LINC02555-201ENST00000563933 1951 ntBASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.57□□□□□ -2
PCDHGB6Q9Y5F9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 RNU6-727P-201ENST00000363592 107 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 SNORA33.2-201ENST00000365413 134 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 SNORD14.1-201ENST00000365609 90 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 MIR504-201ENST00000385065 83 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 SNORA40.9-201ENST00000515895 93 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 AL121655.1-201ENST00000605811 308 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 AC025754.2-201ENST00000606491 432 ntBASIC2.56□□□□□ -2
PCDHGB6Q9Y5F9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms