Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AC008264.2-201ENST00000610193 3731 ntBASIC3.22□□□□□ -1.89
PCDHB4Q9Y5E5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PCDHB4Q9Y5E5 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.89
PCDHB4Q9Y5E5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.89
PCDHB4Q9Y5E5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
PCDHB4Q9Y5E5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AL157777.2-201ENST00000258070 137 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-1272P-201ENST00000362776 107 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.308-201ENST00000365043 101 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-211P-201ENST00000384047 107 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 OOSP1P1-201ENST00000423265 274 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AC024067.1-201ENST00000426199 223 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 RN7SL633P-201ENST00000488974 297 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AP005660.1-201ENST00000522972 293 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 MIR4308-201ENST00000580634 81 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AC006380.1-201ENST00000603598 186 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AC068205.3-201ENST00000636385 468 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AC069528.2-201ENST00000624849 1991 ntBASIC3.21□□□□□ -1.9
PCDHB4Q9Y5E5 AC026241.1-201ENST00000517873 2142 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 RNU1-35P-201ENST00000362782 153 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.304-201ENST00000365011 112 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.329-201ENST00000365209 107 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.506-201ENST00000384494 102 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-125P-201ENST00000384505 107 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 SNORA12-201ENST00000391162 147 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.662-201ENST00000516028 97 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 RN7SKP57-201ENST00000517248 293 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 MIR5195-201ENST00000583555 115 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AL008718.3-201ENST00000610217 321 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 MIR8057-201ENST00000620957 69 ntBASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHB4Q9Y5E5 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.240-201ENST00000364469 95 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.262-201ENST00000364641 102 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 SNORA26.7-201ENST00000391288 122 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 U3.40-201ENST00000408706 208 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 BTF3P11-201ENST00000426582 477 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 RPS29P26-201ENST00000477483 171 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-1278P-201ENST00000516130 107 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-436P-201ENST00000516171 114 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 RN7SKP43-201ENST00000516173 320 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 RNU2-44P-201ENST00000516795 194 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 HSPE1P18-201ENST00000517602 280 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 AL365265.1-201ENST00000621045 234 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 AC021753.1-201ENST00000635724 168 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 U6.106-201ENST00000636360 105 ntBASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHB4Q9Y5E5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-653P-201ENST00000363074 106 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-324P-201ENST00000363957 106 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.435-201ENST00000384095 112 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 Z98742.2-201ENST00000431564 187 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 RPS27P26-201ENST00000494583 239 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-1219P-201ENST00000516143 112 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PCDHB4Q9Y5E5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 RNA5SP387-201ENST00000364226 106 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 SNORA70.4-201ENST00000365509 134 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 SNORA67.2-201ENST00000384300 149 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6-1248P-201ENST00000391096 64 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 AC009414.1-201ENST00000427200 443 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 RPL27AP5-201ENST00000469428 449 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 RPS29P2-201ENST00000479278 136 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 RNA5SP341-201ENST00000516261 117 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms