Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC004866.1-201ENST00000411748 78 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 IFNA11P-201ENST00000446352 526 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC007395.1-201ENST00000451333 677 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC010469.2-201ENST00000496412 480 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP3Q9Y446 RNU6-1045P-201ENST00000516321 107 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 Y_RNA.715-201ENST00000517082 110 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC034114.1-201ENST00000520293 285 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC008737.2-201ENST00000599446 118 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 MZT1P2-201ENST00000604387 248 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 AC116312.1-201ENST00000606841 314 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 SNORD11B-201ENST00000607707 90 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 CTSLP2-204ENST00000629029 392 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 MTND5P35-201ENST00000557537 1720 ntBASIC2.41□□□□□ -2.02
PKP3Q9Y446 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.4□□□□□ -2.02
PKP3Q9Y446 RNU6-727P-201ENST00000363592 107 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 RNU6-1145P-201ENST00000384246 107 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 RNU6-1026P-201ENST00000384465 108 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 Y_RNA.551-201ENST00000384661 102 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 AL033519.2-201ENST00000403958 392 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 MIR1252-201ENST00000408861 65 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 FCF1P4-201ENST00000448326 183 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 RNU7-14P-201ENST00000459331 62 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 RNU6-1012P-201ENST00000516606 109 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 RNU1-117P-201ENST00000517041 158 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 CYCSP23-201ENST00000519781 313 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.4□□□□□ -2.03
PKP3Q9Y446 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
PKP3Q9Y446 AL121655.1-201ENST00000605811 308 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
PKP3Q9Y446 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.4□□□□□ -2.03
PKP3Q9Y446 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PKP3Q9Y446 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.4□□□□□ -2.03
PKP3Q9Y446 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PKP3Q9Y446 RNU6-926P-201ENST00000384075 107 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 Y_RNA.471-201ENST00000384312 102 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 MIR23A-201ENST00000385245 73 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.39□□□□□ -2.03
PKP3Q9Y446 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 UQCRBP2-201ENST00000447827 297 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 MTND5P22-201ENST00000458380 195 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.39□□□□□ -2.03
PKP3Q9Y446 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 AC026436.1-201ENST00000510537 270 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 RNA5SP402-201ENST00000517148 110 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.39□□□□□ -2.03
PKP3Q9Y446 AL355297.3-201ENST00000604082 446 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 AC067747.1-201ENST00000608026 250 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
PKP3Q9Y446 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
PKP3Q9Y446 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PKP3Q9Y446 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PKP3Q9Y446 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
PKP3Q9Y446 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PKP3Q9Y446 Y_RNA.111-201ENST00000363248 100 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 Y_RNA.459-201ENST00000384251 102 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AL357139.1-201ENST00000407792 426 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.38□□□□□ -2.03
PKP3Q9Y446 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
PKP3Q9Y446 DPH3P2-201ENST00000422618 250 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 CR769767.1-201ENST00000436337 346 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 RPEP5-201ENST00000441137 268 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AC009238.1-201ENST00000442165 424 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AC009237.6-201ENST00000446969 424 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 U8.20-201ENST00000459445 131 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 SNORA40.9-201ENST00000515895 93 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.38□□□□□ -2.03
PKP3Q9Y446 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 MIR4659A-201ENST00000580269 81 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AC136443.5-201ENST00000603741 370 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AL078596.1-201ENST00000624856 447 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AC068205.3-201ENST00000636385 468 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
PKP3Q9Y446 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PKP3Q9Y446 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PKP3Q9Y446 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
PKP3Q9Y446 Y_RNA.152-201ENST00000363578 100 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 Y_RNA.153-201ENST00000363615 91 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 SNORA25B-201ENST00000365507 128 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 Y_RNA.415-201ENST00000384012 112 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 snosnR66.1-201ENST00000391095 99 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.37□□□□□ -2.03
PKP3Q9Y446 PCNPP5-201ENST00000452246 481 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 ATP5EP1-201ENST00000510257 156 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 AC067942.3-201ENST00000512025 362 ntBASIC2.37□□□□□ -2.03
PKP3Q9Y446 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms