Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-486P-201ENST00000363116 107 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 RNU6-283P-201ENST00000364788 107 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 SNORA40.19-201ENST00000390846 128 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 RNU6-763P-201ENST00000390865 106 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 SNORA48.8-201ENST00000391324 134 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 RNU6-710P-201ENST00000410424 105 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 RNU6-1135P-201ENST00000411083 103 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 MICF-203ENST00000432679 129 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AC091021.1-201ENST00000468051 388 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AC025518.1-201ENST00000479856 347 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AC093663.1-201ENST00000497190 394 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 RAC1P2-201ENST00000511164 579 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AC108706.1-201ENST00000611053 297 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AL162274.2-201ENST00000614406 332 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AP003355.3-201ENST00000623465 114 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 AC058791.1-201ENST00000608412 3198 ntBASIC2.94□□□□□ -1.94
CDC42EP3Q9UKI2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 AP002088.1-201ENST00000382740 395 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 Y_RNA.571-201ENST00000384753 98 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 MIR1185-2-201ENST00000408687 86 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 U8.19-201ENST00000459095 133 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 SRIP1-201ENST00000489235 288 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 RNU7-200P-201ENST00000516105 62 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 RNA5SP380-201ENST00000517190 98 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 AC100767.1-201ENST00000528178 123 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 MIR3144-201ENST00000579460 79 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 AL670379.2-201ENST00000604983 252 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 AC002064.3-201ENST00000623448 346 ntBASIC2.93□□□□□ -1.94
CDC42EP3Q9UKI2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 SNORD114-7-201ENST00000362520 77 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 Y_RNA.121-201ENST00000363309 113 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 SNORA51.4-201ENST00000364993 124 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 SNORA26.5-201ENST00000391215 123 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 RNA5SP293-201ENST00000410527 113 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC006989.1-201ENST00000427212 131 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC146507.2-201ENST00000460608 476 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 HMGN2P9-201ENST00000476875 229 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 MIR3684-201ENST00000579779 74 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 UCA1.1-201ENST00000620952 75 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC006386.2-201ENST00000624491 75 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC012005.1-201ENST00000624575 75 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
CDC42EP3Q9UKI2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 Y_RNA.7-201ENST00000362352 102 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 RNU4-35P-201ENST00000362588 141 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 MIR1289-1-201ENST00000408836 144 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 RPL27AP5-201ENST00000469428 449 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 MRPS36P2-201ENST00000512569 299 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 NDUFB9P3-201ENST00000521269 501 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 MIR5680-201ENST00000577577 84 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 MIR7112-201ENST00000616126 65 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 AC013791.1-201ENST00000616619 62 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 AC103988.1-201ENST00000566382 2177 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 AC010329.5-201ENST00000623497 2174 ntBASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP3Q9UKI2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CDC42EP3Q9UKI2 AC068700.1-201ENST00000565862 3754 ntBASIC2.9□□□□□ -1.94
CDC42EP3Q9UKI2 Y_RNA.310-201ENST00000365063 113 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 SNORD113-1-201ENST00000365321 69 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 SNORD50.2-201ENST00000365465 70 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 SNORA72.4-201ENST00000384174 132 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.456-201ENST00000384232 111 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-804P-201ENST00000384286 107 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.580-201ENST00000391004 95 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 MIR300-201ENST00000401138 83 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 U3.39-201ENST00000408569 239 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SKP284-201ENST00000411002 343 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 RNU5E-9P-201ENST00000411164 104 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AL139281.1-201ENST00000422120 335 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AC010401.1-201ENST00000463867 348 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SL442P-201ENST00000473804 320 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 RNU5F-4P-201ENST00000516581 114 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 MTND5P41-201ENST00000517498 206 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms