Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 U3.8-201ENST00000363675 217 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 SNORA67.3-201ENST00000384366 140 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 Y_RNA.505-201ENST00000384489 102 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 RNU6-360P-201ENST00000390944 104 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 RNU6-159P-201ENST00000391080 106 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AL117342.1-201ENST00000404861 406 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC060773.1-201ENST00000421698 310 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC096638.1-201ENST00000444678 216 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 RNU7-57P-201ENST00000459540 60 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 RPL36AP21-201ENST00000490372 323 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 MTND5P5-201ENST00000503764 376 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 SNORA25.14-201ENST00000516481 132 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC024995.1-201ENST00000523014 93 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 IGKV3-31-201ENST00000523109 329 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 MIR4742-201ENST00000581069 85 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC100812.1-201ENST00000607622 580 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 AC245060.5-201ENST00000610778 3293 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 RNU6-862P-201ENST00000362804 105 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 RNU6-414P-201ENST00000363705 104 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 RNU6-296P-201ENST00000384608 107 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 RNU6-306P-201ENST00000384617 107 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 AC099677.2-201ENST00000436385 175 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 Z82188.1-201ENST00000436709 154 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 HMGB1P18-201ENST00000438801 619 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 UBL5P3-201ENST00000475112 231 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 RNA5SP384-201ENST00000516615 116 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 Y_RNA.706-201ENST00000516933 99 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 MIR5089-201ENST00000580047 84 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 AC011712.1-201ENST00000588959 234 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 AC092794.1-201ENST00000612734 582 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 MIR6128-201ENST00000615528 109 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 MIR338-201ENST00000636369 67 ntBASIC1.73□□□□□ -2.13
CHCHD3Q9NX63 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RNU6-873P-201ENST00000363833 107 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 SNORA63D-201ENST00000364359 132 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RNA5SP126-201ENST00000365092 109 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RNU6-793P-201ENST00000384233 104 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 MIR549A-201ENST00000385268 96 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AC074085.1-201ENST00000413598 418 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 Z98742.3-201ENST00000418637 326 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AC107399.1-201ENST00000451226 265 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RNU6-221P-201ENST00000459541 99 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RN7SL429P-201ENST00000479090 223 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RN7SL489P-201ENST00000486185 223 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RN7SL327P-201ENST00000488659 223 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AC093303.1-201ENST00000514549 295 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RNU6-1041P-201ENST00000516254 102 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RNU6-307P-201ENST00000516743 106 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AL121579.1-201ENST00000555129 305 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AC091544.4-201ENST00000555268 342 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AC018462.2-201ENST00000605375 395 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 RN7SL853P-201ENST00000617250 223 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 MTND4P12-201ENST00000498999 1377 ntBASIC1.72□□□□□ -2.13
CHCHD3Q9NX63 AL161722.3-201ENST00000605789 2983 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.533-201ENST00000384596 114 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 RNU1-139P-201ENST00000391307 165 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 MIR1253-201ENST00000408273 105 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 MIR548K-201ENST00000408406 116 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 RN7SKP32-201ENST00000410167 303 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 AC245047.4-201ENST00000433189 144 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 RNU6-1114P-201ENST00000516022 107 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.682-201ENST00000516457 100 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 CYCSP23-201ENST00000519781 313 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 MTND5P6-201ENST00000422338 1798 ntBASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.14
CHCHD3Q9NX63 RNA5SP289-201ENST00000362332 137 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 RNU6-955P-201ENST00000410497 104 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 RNU6-57P-201ENST00000411348 103 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 AL139156.1-201ENST00000412785 841 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 USP9YP30-201ENST00000430729 455 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 HMGN2P23-201ENST00000456759 269 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 FO393415.2-201ENST00000480085 343 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 AC008549.1-201ENST00000512900 643 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 RNU1-117P-201ENST00000517041 158 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms