Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 CYCSP23-201ENST00000519781 313 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 MIR3136-201ENST00000583498 78 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH18Q9HCL0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.7-201ENST00000362352 102 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 RNU1-62P-201ENST00000362599 164 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 SNORA26.5-201ENST00000391215 123 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AL714022.1-201ENST00000439897 151 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AL358232.1-201ENST00000448030 501 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 RPL32P34-201ENST00000486380 400 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 RNU2-12P-201ENST00000517216 168 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 MIR5692C2-201ENST00000577959 77 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 UBL5P2-201ENST00000583788 219 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AC091895.1-201ENST00000624494 256 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 AC010889.1-201ENST00000566193 2666 ntBASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH18Q9HCL0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 RNU6-801P-201ENST00000364087 105 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.435-201ENST00000384095 112 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.441-201ENST00000384123 112 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.497-201ENST00000384447 98 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 SNORD15B-201ENST00000384714 146 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 MIR320B2-201ENST00000408479 138 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 AC108706.1-201ENST00000611053 297 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 AC005562.2-201ENST00000618264 111 ntBASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH18Q9HCL0 SNORD114-19-201ENST00000363072 75 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RNU6-151P-201ENST00000364158 107 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.293-201ENST00000364908 93 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RNU6-449P-201ENST00000383914 107 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RNU1-101P-201ENST00000391171 127 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RNA5SP504-201ENST00000410676 117 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 AIMP1P2-201ENST00000425294 312 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 AC006028.1-201ENST00000438379 402 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RPS20P10-201ENST00000451209 253 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RN7SL504P-201ENST00000494496 287 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 SNORD116-25-201ENST00000516517 92 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 RNU2-44P-201ENST00000516795 194 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 MIR622-201ENST00000638396 96 ntBASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH18Q9HCL0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AC100821.1-201ENST00000523153 2479 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AC073325.2-201ENST00000339545 159 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 RNU4-17P-201ENST00000365598 141 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 MIR34B-201ENST00000385076 84 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AL031003.1-201ENST00000404229 172 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 RNA5SP38-201ENST00000410750 119 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 RNU6-426P-201ENST00000516464 97 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AC009127.3-201ENST00000570531 403 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 AC005520.5-201ENST00000613926 164 ntBASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDH18Q9HCL0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms