Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC091144.1-201ENST00000519573 138 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PCDH9Q9HC56 GNAI2P1-201ENST00000541815 315 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 SNORD53-201ENST00000579969 78 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 MIR4513-201ENST00000581077 86 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.25□□□□□ -2.05
PCDH9Q9HC56 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 AL162373.1-201ENST00000620433 407 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
PCDH9Q9HC56 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PCDH9Q9HC56 MTND5P6-201ENST00000422338 1798 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 SNORD14.1-201ENST00000365609 90 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.422-201ENST00000384054 114 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.645-201ENST00000391229 102 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 MIR1294-201ENST00000408503 142 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 RNA5SP508-201ENST00000411327 119 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AC113618.1-201ENST00000416747 285 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 EIF1P2-201ENST00000428233 350 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AC004386.2-201ENST00000441858 148 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 CYP2C59P-201ENST00000457790 269 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.24□□□□□ -2.05
PCDH9Q9HC56 CBX3P7-201ENST00000532876 502 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AC093023.1-201ENST00000547375 507 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 MIR4680-201ENST00000580906 66 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
PCDH9Q9HC56 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AC104695.3-201ENST00000604052 296 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 AL590808.1-201ENST00000618696 141 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
PCDH9Q9HC56 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDH9Q9HC56 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 RNA5SP361-201ENST00000362686 118 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 RNU6-727P-201ENST00000363592 107 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.158-201ENST00000363651 101 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 RNU6-743P-201ENST00000364151 106 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 RNU6-926P-201ENST00000384075 107 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 SNORA51.11-201ENST00000384442 131 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 MIR320B2-201ENST00000408479 138 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 MTCO3P19-201ENST00000415864 321 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AC007215.1-201ENST00000464893 276 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 RNU2-44P-201ENST00000516795 194 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 DEFB131C-201ENST00000528817 165 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AC040926.1-201ENST00000530195 238 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 MIR5006-201ENST00000583027 110 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 RPS29P30-201ENST00000600975 111 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AC124312.5-201ENST00000604451 268 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 SNRPGP20-201ENST00000604477 205 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AL360085.1-201ENST00000604713 532 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 AC005562.2-201ENST00000618264 111 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
PCDH9Q9HC56 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDH9Q9HC56 BX322639.1-202ENST00000423987 2213 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU1-23P-201ENST00000363361 144 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 SNORD115-8-201ENST00000363856 82 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU6-280P-201ENST00000364145 104 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 SNORD32B-201ENST00000364460 84 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 SNORD115-38-201ENST00000365037 82 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNA5SP240-201ENST00000365355 128 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AC117470.1-201ENST00000381974 330 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU6-26P-201ENST00000383985 107 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU6-281P-201ENST00000384212 103 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU1-139P-201ENST00000391307 165 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU6-101P-201ENST00000410323 104 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU6-1001P-201ENST00000411265 100 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 MTND2P23-201ENST00000422990 651 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDH9Q9HC56 IPO7P1-201ENST00000442031 636 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AC010095.1-201ENST00000443543 144 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AC096638.1-201ENST00000444678 216 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RPL23AP94-201ENST00000512518 302 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU6-327P-201ENST00000516270 127 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 SNORA40.14-201ENST00000516543 86 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 RNU5F-4P-201ENST00000516581 114 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AL138825.1-201ENST00000618587 192 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
PCDH9Q9HC56 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
PCDH9Q9HC56 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDH9Q9HC56 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.05
PCDH9Q9HC56 RNU6-1301P-201ENST00000362724 104 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 RNU6-137P-201ENST00000363680 108 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 RNU6-546P-201ENST00000383991 107 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 RNU6-1160P-201ENST00000384546 104 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 MIR95-201ENST00000385072 81 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AL033519.2-201ENST00000403958 392 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AL135786.1-201ENST00000415892 214 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms