Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BCAS3Q9H6U6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.7-201ENST00000362352 102 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 MIR208B-201ENST00000401172 77 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 CBX3P9-201ENST00000402326 552 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 AL591034.1-201ENST00000407447 340 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 RNU6-155P-201ENST00000516347 100 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 GTF3AP2-201ENST00000557014 266 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 AC105137.2-201ENST00000569073 466 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 MIR3945-201ENST00000581853 98 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 AL034555.1-201ENST00000604816 211 ntBASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BCAS3Q9H6U6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 RNA5SP432-201ENST00000362480 116 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 RNU2-37P-201ENST00000410695 177 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 AIMP1P2-201ENST00000425294 312 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 AC024067.1-201ENST00000426199 223 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.637-201ENST00000459424 114 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 RNU7-23P-201ENST00000459465 62 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 RNU6-436P-201ENST00000516171 114 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 RNU2-58P-201ENST00000516403 183 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 RPS15AP11-201ENST00000594193 385 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 DEFB117-201ENST00000602356 141 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 PCGEM1.1-201ENST00000613431 131 ntBASIC3.31□□□□□ -1.88
BCAS3Q9H6U6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 RNU6-19P-201ENST00000384718 107 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 MIR549A-201ENST00000385268 96 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 RNA5SP475-201ENST00000410568 110 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 RPS15AP5-201ENST00000436276 388 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 AC009127.3-201ENST00000570531 403 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 MIR3145-201ENST00000580727 82 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 AC093831.2-201ENST00000624393 3427 ntBASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
BCAS3Q9H6U6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 RNU4-84P-201ENST00000364200 139 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 RNU6-454P-201ENST00000364292 107 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.238-201ENST00000364441 102 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.361-201ENST00000365515 120 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 U3.40-201ENST00000408706 208 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 AC107626.1-201ENST00000471084 183 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 HMGB3P3-201ENST00000510526 400 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 RNA5SP356-201ENST00000515972 94 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 RNA5SP367-201ENST00000516557 118 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 EIF4A1P12-201ENST00000551910 141 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 AC006380.1-201ENST00000603598 186 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 TCL6_2.1-201ENST00000615162 119 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BCAS3Q9H6U6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 MIR449A-201ENST00000362113 91 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.40-201ENST00000362645 93 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 RNU6-529P-201ENST00000363383 104 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 RNU4-17P-201ENST00000365598 141 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 Y_RNA.400-201ENST00000383963 111 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 RNU6-1117P-201ENST00000384525 104 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 BTF3P11-201ENST00000426582 477 ntBASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.28□□□□□ -1.88
BCAS3Q9H6U6 snoU13.28-201ENST00000459235 104 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms