Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SCARNA4-201ENST00000629045 128 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 MIR7157-201ENST00000635801 60 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 U6.92-201ENST00000636464 89 ntBASIC2.51□□□□□ -2.01
CDT1Q9H211 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDT1Q9H211 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.51□□□□□ -2.01
CDT1Q9H211 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CDT1Q9H211 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU6-379P-201ENST00000363813 104 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU6-1318P-201ENST00000365389 103 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 U8.10-201ENST00000384260 133 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU6-318P-201ENST00000384283 103 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 MIR549A-201ENST00000385268 96 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 U6atac.2-201ENST00000408644 118 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 USP9YP16-201ENST00000430287 407 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.5□□□□□ -2.01
CDT1Q9H211 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.5□□□□□ -2.01
CDT1Q9H211 RPL39P40-201ENST00000445481 146 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 USP9YP23-201ENST00000455085 407 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 snoU13.26-201ENST00000459452 105 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AC090515.1-201ENST00000465295 476 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 ANXA2P1-201ENST00000505539 926 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU6-408P-201ENST00000515910 100 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU1-41P-201ENST00000516161 162 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU1-48P-201ENST00000516400 162 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU6-911P-201ENST00000516523 104 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 RNU6-1271P-201ENST00000517049 105 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AC034114.1-201ENST00000520293 285 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.5□□□□□ -2.01
CDT1Q9H211 AL442163.3-201ENST00000554110 156 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.5□□□□□ -2.01
CDT1Q9H211 AC136932.1-201ENST00000574771 208 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AC105245.1-201ENST00000581934 244 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AC100812.1-201ENST00000607622 580 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 AL449363.1-201ENST00000617815 186 ntBASIC2.5□□□□□ -2.01
CDT1Q9H211 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDT1Q9H211 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
CDT1Q9H211 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.49□□□□□ -2.01
CDT1Q9H211 RNU4-15P-201ENST00000362613 141 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 Y_RNA.188-201ENST00000363952 111 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 RNU4-56P-201ENST00000364700 142 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDT1Q9H211 MT-TG-201ENST00000387429 68 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 MT-TR-201ENST00000387439 65 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.49□□□□□ -2.01
CDT1Q9H211 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.49□□□□□ -2.01
CDT1Q9H211 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.49□□□□□ -2.01
CDT1Q9H211 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.49□□□□□ -2.01
CDT1Q9H211 AP000870.1-201ENST00000472927 406 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 Y_RNA.706-201ENST00000516933 99 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 RNU6-570P-201ENST00000517051 105 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AC022868.1-201ENST00000517767 391 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AC023157.2-201ENST00000540596 141 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.49□□□□□ -2.01
CDT1Q9H211 UBL5P4-201ENST00000562584 236 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AC023824.2-201ENST00000566185 400 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.49□□□□□ -2.01
CDT1Q9H211 MIR3923-201ENST00000579521 83 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 RPS29P30-201ENST00000600975 111 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AL356575.1-201ENST00000603008 283 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AL390123.1-201ENST00000603216 237 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AC069294.1-201ENST00000608397 350 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 AC062037.2-201ENST00000610137 73 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 MIR6766-201ENST00000622641 72 ntBASIC2.49□□□□□ -2.01
CDT1Q9H211 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CDT1Q9H211 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDT1Q9H211 Y_RNA.27-201ENST00000362540 103 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 snoU2_19.2-201ENST00000363024 80 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 SNORA25.6-201ENST00000364121 118 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 RNU4-50P-201ENST00000364361 141 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 RNU6-611P-201ENST00000384276 104 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MTCYBP2-201ENST00000407745 171 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AC007064.1-201ENST00000412238 351 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MTCO3P19-201ENST00000415864 321 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDT1Q9H211 EIF1P2-201ENST00000428233 350 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.48□□□□□ -2.01
CDT1Q9H211 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 SNORD127-201ENST00000458892 86 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.48□□□□□ -2.01
CDT1Q9H211 RNU6-567P-201ENST00000516746 107 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 CYP4A27P-201ENST00000567218 190 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AC090617.3-201ENST00000573670 475 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AL713866.2-201ENST00000603579 219 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AL138825.1-201ENST00000618587 192 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AC090517.3-201ENST00000625170 141 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AC080100.1-201ENST00000624239 5356 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 AC010615.1-201ENST00000594254 1764 ntBASIC2.48□□□□□ -2.01
CDT1Q9H211 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDT1Q9H211 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 MIR6073-201ENST00000352083 89 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNA5SP361-201ENST00000362686 118 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU6-1301P-201ENST00000362724 104 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms