Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 RNU6-472P-201ENST00000384299 107 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AL357139.1-201ENST00000407792 426 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 RNU6-1203P-201ENST00000410703 110 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AC003685.2-201ENST00000422795 395 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AC092427.1-202ENST00000430569 476 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AC114982.1-201ENST00000469402 321 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 SRIP1-201ENST00000489235 288 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AC107222.1-201ENST00000510899 637 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AC006380.1-201ENST00000603598 186 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 MTND5P6-201ENST00000422338 1798 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 AC096644.4-201ENST00000563417 2912 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 RNU1-23P-201ENST00000363361 144 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 U3.8-201ENST00000363675 217 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 RNA5SP125-201ENST00000364843 120 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 MIR586-201ENST00000385035 97 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 MIR1283-1-201ENST00000408494 87 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 AC107083.1-201ENST00000439643 279 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 SNORD127-201ENST00000458892 86 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 RNU6-1271P-201ENST00000517049 105 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 AC007536.1-201ENST00000533382 349 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 MIR3671-201ENST00000580455 88 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 AC091932.3-201ENST00000624223 323 ntBASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC113Q9H0I3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 AL391987.6-201ENST00000305671 199 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 SNORD81.1-201ENST00000363064 77 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 SNORA67.2-201ENST00000384300 149 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 SNORA53-201ENST00000391141 249 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 RNA5SP504-201ENST00000410676 117 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 AC005042.3-201ENST00000453230 174 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 RNU6-496P-201ENST00000516145 99 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 RNA5SP490-201ENST00000517141 136 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 DEFB108E-201ENST00000524692 240 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 MIR4423-201ENST00000580922 80 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 AC037487.3-201ENST00000606668 112 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 MIR1248-201ENST00000629190 106 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 AL161431.1-201ENST00000618966 4205 ntBASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CCDC113Q9H0I3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 AC092593.1-201ENST00000515413 1815 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 SNORD31B-201ENST00000364977 69 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 TOMM22P2-201ENST00000430735 237 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 HMGN2P18-201ENST00000450680 270 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 ATP5EP1-201ENST00000510257 156 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 AC022441.3-201ENST00000605737 136 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 AC008873.1-201ENST00000625051 138 ntBASIC3.22□□□□□ -1.89
CCDC113Q9H0I3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCDC113Q9H0I3 U8.9-201ENST00000365667 134 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 RNU6-102P-201ENST00000384485 104 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 MIR548B-201ENST00000385247 97 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 AL135938.1-201ENST00000443141 297 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 AC104389.3-201ENST00000445629 235 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 RNU7-57P-201ENST00000459540 60 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 RN7SL633P-201ENST00000488974 297 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 AC055872.1-201ENST00000570978 278 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 AC008749.1-201ENST00000597650 306 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 AL109918.3-201ENST00000603072 338 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC113Q9H0I3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 SNORA80A-201ENST00000363922 136 ntBASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 RNU6-290P-201ENST00000365212 101 ntBASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 SNORA9.2-201ENST00000365361 133 ntBASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 Y_RNA.476-201ENST00000384347 108 ntBASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
CCDC113Q9H0I3 Y_RNA.541-201ENST00000384640 113 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms