Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ICE2P2-201ENST00000483823 2787 ntBASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-3Q9BYR4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP133-201ENST00000363368 119 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORD35B-201ENST00000363660 87 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP399-201ENST00000364003 117 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP387-201ENST00000364226 106 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORD87-201ENST00000364849 89 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORD82-201ENST00000365530 70 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-520P-201ENST00000384717 104 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR30B-201ENST00000384850 88 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR34A-201ENST00000385130 110 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR660-201ENST00000385235 97 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP292-201ENST00000390974 118 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR873-201ENST00000401120 77 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR1271-201ENST00000408537 86 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RN7SKP111-201ENST00000410349 271 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RN7SKP202-201ENST00000410439 330 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RPS21P8-201ENST00000413365 247 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RPL36P19-201ENST00000430744 301 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AP000936.3-201ENST00000438127 255 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 HMGB1P37-201ENST00000439613 609 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AC069257.2-201ENST00000441819 155 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AC245102.2-201ENST00000448956 180 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AC012308.1-201ENST00000451232 178 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU7-85P-201ENST00000458851 63 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR1270-201ENST00000459320 83 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AP000873.1-201ENST00000463987 400 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 PPIAP15-201ENST00000479662 484 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RPL31P13-201ENST00000484151 370 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ACA59.2-201ENST00000517061 156 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP179-201ENST00000517284 121 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR3675-201ENST00000583661 73 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR5684-201ENST00000585074 65 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR3922-201ENST00000585192 84 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AL356280.1-201ENST00000603614 379 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AC091167.4-201ENST00000605079 184 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AL356157.2-201ENST00000605122 111 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 CR392039.5-201ENST00000623201 510 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AP000542.2-201ENST00000623199 6179 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 WWP1P1-201ENST00000466609 2769 ntBASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-3Q9BYR4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU1-15P-201ENST00000353977 144 ntBASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-247P-201ENST00000362636 107 ntBASIC1.37□□□□□ -2.19
KRTAP4-3Q9BYR4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms