Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL021921.1-201ENST00000442774 93 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 DEFA11P-201ENST00000446470 261 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 PPIAP20-201ENST00000449839 135 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL610P-201ENST00000463845 291 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 AC055731.1-201ENST00000474387 401 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 AC018645.1-201ENST00000505003 109 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF519P4-201ENST00000514008 125 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA31.1-201ENST00000515993 133 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA31.5-201ENST00000516190 133 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR514B-201ENST00000516774 80 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 AP006245.2-201ENST00000522004 300 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 IGLV3-30-201ENST00000524362 298 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 AC079905.1-201ENST00000549280 475 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 GTF3AP2-201ENST00000557014 266 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL199P-201ENST00000578752 281 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL656P-201ENST00000579044 281 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL270P-201ENST00000579643 281 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 AC008739.3-201ENST00000603262 127 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR7109-201ENST00000613748 65 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 uc_338.31-201ENST00000615595 186 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 AL592182.3-201ENST00000642132 3304 ntBASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
KRTAP4-4Q9BYR3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 AL360270.2-201ENST00000562952 5985 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 AC092376.2-201ENST00000622621 4116 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 AC020656.2-201ENST00000613291 5309 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP321-201ENST00000362722 111 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP391-201ENST00000363456 119 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP512-201ENST00000364550 120 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA70.3-201ENST00000365075 132 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 Y_RNA.321-201ENST00000365149 102 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.16□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA15B-2-201ENST00000384058 135 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms