Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 AC079598.5-201ENST00000547460 117 ntBASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 uc_338.14-201ENST00000613162 166 ntBASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZKSCAN3Q9BRR0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 AC010332.2-201ENST00000613083 1904 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU6-1048P-201ENST00000364054 107 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU4-10P-201ENST00000364383 140 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 SNORA40-201ENST00000388090 126 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR526A2-201ENST00000390198 65 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 AC010401.1-201ENST00000463867 348 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 MIR5688-201ENST00000580619 83 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 DNAJC19P2-201ENST00000593340 302 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 AL365222.1-201ENST00000614661 98 ntBASIC3.78□□□□□ -1.8
ZKSCAN3Q9BRR0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC073346.2-201ENST00000624724 2058 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 Y_RNA.81-201ENST00000362997 102 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-818P-201ENST00000364837 108 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 Y_RNA.310-201ENST00000365063 113 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR616-201ENST00000385293 97 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 RPL30P13-201ENST00000418873 348 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AL159169.1-201ENST00000421119 127 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC008267.6-201ENST00000441664 139 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC074290.1-201ENST00000448883 135 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC115115.1-201ENST00000449927 248 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 RPL23AP62-201ENST00000463396 453 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 RN7SL807P-201ENST00000470923 297 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 RPS29P2-201ENST00000479278 136 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 RPL36AP48-201ENST00000485521 314 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA31.21-201ENST00000517180 77 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC022616.8-201ENST00000533569 253 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC109810.1-201ENST00000534066 224 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 YPEL5P2-201ENST00000605553 359 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC006111.3-201ENST00000622137 383 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AL021368.2-201ENST00000606125 5352 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC068700.1-201ENST00000565862 3754 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 AC100821.1-201ENST00000523153 2479 ntBASIC3.77□□□□□ -1.81
ZKSCAN3Q9BRR0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 Y_RNA.24-201ENST00000362508 103 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 RNA5SP374-201ENST00000362939 125 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU4-11P-201ENST00000365287 132 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR586-201ENST00000385035 97 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR513C-201ENST00000401352 84 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA11.1-201ENST00000408133 129 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 Y_RNA.629-201ENST00000411368 105 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 RN7SL863P-201ENST00000462370 296 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 RN7SKP57-201ENST00000517248 293 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR5195-201ENST00000583555 115 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 RMST_8.1-201ENST00000610287 165 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 AL391903.3-201ENST00000612158 163 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 uc_338.25-201ENST00000613756 156 ntBASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ZKSCAN3Q9BRR0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA38.1-201ENST00000364172 131 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 Y_RNA.337-201ENST00000365312 102 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR548B-201ENST00000385247 97 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AC006028.1-201ENST00000438379 402 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 HMGN1P18-201ENST00000457642 277 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU7-141P-201ENST00000459304 62 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 RNA5SP272-201ENST00000516095 111 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-1007P-201ENST00000516586 107 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA70.24-201ENST00000517233 118 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR3200-201ENST00000580767 85 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 UBL5P2-201ENST00000583788 219 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AL670379.2-201ENST00000604983 252 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AC025754.2-201ENST00000606491 432 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 AC000403.1-201ENST00000613696 3585 ntBASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZKSCAN3Q9BRR0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms