Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CPNE1Q99829 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPNE1Q99829 AL159152.1-201ENST00000635019 2587 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
CPNE1Q99829 Y_RNA.142-201ENST00000363491 102 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU6-1305P-201ENST00000364353 104 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU6-975P-201ENST00000384296 105 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 SNORA8-201ENST00000384574 139 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 SNORA3.2-201ENST00000408221 125 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU4-14P-201ENST00000410858 122 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.86□□□□□ -2.11
CPNE1Q99829 MTCYBP10-201ENST00000424905 650 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 MTND3P23-201ENST00000431980 347 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 MTND4P18-201ENST00000447010 465 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU6-498P-201ENST00000459468 107 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 AP000870.1-201ENST00000472927 406 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 RNU6-856P-201ENST00000516959 98 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.86□□□□□ -2.11
CPNE1Q99829 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.86□□□□□ -2.11
CPNE1Q99829 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
CPNE1Q99829 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.86□□□□□ -2.11
CPNE1Q99829 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 AC113139.1-201ENST00000605049 239 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 AL078596.1-201ENST00000624856 447 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 AL669831.3-213ENST00000636676 183 ntBASIC1.86□□□□□ -2.11
CPNE1Q99829 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CPNE1Q99829 SNORA67.2-201ENST00000384300 149 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 RNU6-331P-201ENST00000384724 107 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 RNA5SP212-201ENST00000391223 107 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 RNU6-370P-201ENST00000411008 104 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 USP9YP16-201ENST00000430287 407 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 AL353997.1-201ENST00000432936 108 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 RPL23AP50-201ENST00000434149 455 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 USP9YP23-201ENST00000455085 407 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.85□□□□□ -2.11
CPNE1Q99829 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
CPNE1Q99829 AC008549.1-201ENST00000512900 643 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 RNU6-1114P-201ENST00000516022 107 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 SCARNA16.2-201ENST00000516520 172 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 RNU1-117P-201ENST00000517041 158 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 UBL5P4-201ENST00000562584 236 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.85□□□□□ -2.11
CPNE1Q99829 AC083806.3-201ENST00000614016 455 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 AC064859.1-201ENST00000624741 174 ntBASIC1.85□□□□□ -2.11
CPNE1Q99829 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CPNE1Q99829 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CPNE1Q99829 AC245060.5-201ENST00000610778 3293 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 RNU6-793P-201ENST00000384233 104 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 Y_RNA.474-201ENST00000384341 102 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 MIR10B-201ENST00000385011 110 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 RNU1-139P-201ENST00000391307 165 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 MIR190B-201ENST00000401119 79 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AL445305.1-201ENST00000432577 575 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 ATP5J2P3-201ENST00000451550 258 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.84□□□□□ -2.11
CPNE1Q99829 AC097473.1-201ENST00000508142 408 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 MIR5690-201ENST00000583739 73 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.84□□□□□ -2.11
CPNE1Q99829 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
CPNE1Q99829 AC092794.2-201ENST00000620933 563 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AL359757.2-201ENST00000624309 274 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 AC068205.3-201ENST00000636385 468 ntBASIC1.84□□□□□ -2.11
CPNE1Q99829 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CPNE1Q99829 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CPNE1Q99829 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CPNE1Q99829 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CPNE1Q99829 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CPNE1Q99829 MIR449A-201ENST00000362113 91 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 Y_RNA.106-201ENST00000363189 100 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 Y_RNA.303-201ENST00000364998 94 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AC007098.1-201ENST00000420122 367 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.83□□□□□ -2.12
CPNE1Q99829 RNVU1-2-201ENST00000516326 135 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 RNU6-1213P-201ENST00000517075 94 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
CPNE1Q99829 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.83□□□□□ -2.12
CPNE1Q99829 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.83□□□□□ -2.12
CPNE1Q99829 MIR5695-201ENST00000579717 85 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AP001094.1-201ENST00000579805 193 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 MIR548S-201ENST00000581352 82 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AC013412.1-201ENST00000610687 192 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AC025253.1-201ENST00000613623 543 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
CPNE1Q99829 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
CPNE1Q99829 RNU6-1188P-201ENST00000363795 107 ntBASIC1.82□□□□□ -2.12
CPNE1Q99829 Y_RNA.179-201ENST00000363844 90 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms