Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.37□□□□□ -2.03
NPAS1Q99742 ATP5EP1-201ENST00000510257 156 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS1Q99742 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS1Q99742 RNU6-408P-201ENST00000515910 100 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 RNU6-764P-201ENST00000516396 105 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC034114.1-201ENST00000520293 285 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.37□□□□□ -2.03
NPAS1Q99742 AC026271.5-201ENST00000577873 130 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC022432.1-201ENST00000595739 310 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC008737.2-201ENST00000599446 118 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 Y_RNA.772-201ENST00000606692 102 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC068205.3-201ENST00000636385 468 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 U6.92-201ENST00000636464 89 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPAS1Q99742 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.37□□□□□ -2.03
NPAS1Q99742 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPAS1Q99742 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPAS1Q99742 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPAS1Q99742 RNU6-859P-201ENST00000362728 107 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 Y_RNA.152-201ENST00000363578 100 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 Y_RNA.510-201ENST00000384511 114 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 AC113618.1-201ENST00000416747 285 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 DPH3P2-201ENST00000422618 250 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.36□□□□□ -2.03
NPAS1Q99742 AL137159.1-201ENST00000452808 512 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.36□□□□□ -2.03
NPAS1Q99742 RNU6-625P-201ENST00000459412 107 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 U8.20-201ENST00000459445 131 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.36□□□□□ -2.03
NPAS1Q99742 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.36□□□□□ -2.03
NPAS1Q99742 AC093259.1-201ENST00000509755 300 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 SNORA40.9-201ENST00000515895 93 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 RNU6-397P-201ENST00000516226 104 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 RNU6-327P-201ENST00000516270 127 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 RNU6-1137P-201ENST00000517073 99 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 AL121655.1-201ENST00000605811 308 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 AC240442.1-201ENST00000616055 283 ntBASIC2.36□□□□□ -2.03
NPAS1Q99742 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.35□□□□□ -2.03
NPAS1Q99742 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.35□□□□□ -2.03
NPAS1Q99742 SNORA72.2-201ENST00000365028 127 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 Y_RNA.439-201ENST00000384119 94 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 Y_RNA.459-201ENST00000384251 102 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 Y_RNA.551-201ENST00000384661 102 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 RNU6-985P-201ENST00000410182 104 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 RNA5SP475-201ENST00000410568 110 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 RNA5SP184-201ENST00000411071 108 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 AC063976.3-201ENST00000426849 329 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 SDAD1P3-201ENST00000427380 333 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 PRELID3BP1-201ENST00000457142 540 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.35□□□□□ -2.03
NPAS1Q99742 RNA5SP282-201ENST00000516355 108 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.35□□□□□ -2.03
NPAS1Q99742 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 AL360085.1-201ENST00000604713 532 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 AC013412.1-201ENST00000610687 192 ntBASIC2.35□□□□□ -2.03
NPAS1Q99742 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NPAS1Q99742 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 SNORA63.7-201ENST00000365579 123 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 Y_RNA.380-201ENST00000365663 111 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 RNU6-418P-201ENST00000384035 107 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 SNORA80E-201ENST00000384744 137 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 MIR1252-201ENST00000408861 65 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
NPAS1Q99742 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.34□□□□□ -2.03
NPAS1Q99742 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.34□□□□□ -2.03
NPAS1Q99742 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.34□□□□□ -2.03
NPAS1Q99742 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.34□□□□□ -2.03
NPAS1Q99742 RNU7-57P-201ENST00000459540 60 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.34□□□□□ -2.03
NPAS1Q99742 AC074133.1-201ENST00000515696 183 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 SNORA40.15-201ENST00000516884 107 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 Y_RNA.713-201ENST00000517013 96 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 Y_RNA.715-201ENST00000517082 110 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 AC018448.1-201ENST00000552843 316 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 AL357075.2-201ENST00000614906 189 ntBASIC2.34□□□□□ -2.03
NPAS1Q99742 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NPAS1Q99742 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NPAS1Q99742 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPAS1Q99742 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
NPAS1Q99742 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.33□□□□□ -2.04
NPAS1Q99742 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NPAS1Q99742 Y_RNA.458-201ENST00000384240 102 ntBASIC2.33□□□□□ -2.04
NPAS1Q99742 RNU2-48P-201ENST00000410694 191 ntBASIC2.33□□□□□ -2.04
NPAS1Q99742 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.33□□□□□ -2.04
NPAS1Q99742 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.33□□□□□ -2.04
NPAS1Q99742 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.33□□□□□ -2.04
NPAS1Q99742 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.33□□□□□ -2.04
NPAS1Q99742 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
NPAS1Q99742 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.33□□□□□ -2.04
NPAS1Q99742 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
NPAS1Q99742 RNU6-948P-201ENST00000516374 107 ntBASIC2.33□□□□□ -2.04
NPAS1Q99742 RNU6-1012P-201ENST00000516606 109 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms