Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHOX2BQ99453 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHOX2BQ99453 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHOX2BQ99453 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHOX2BQ99453 U8.11-201ENST00000384699 133 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 MIR1289-1-201ENST00000408836 144 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 HMGN2P18-201ENST00000450680 270 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 U8.18-201ENST00000459285 133 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 RN7SL293P-201ENST00000481765 281 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 RNA5SP490-201ENST00000517141 136 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 MIR3117-201ENST00000584034 78 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 MIR3922-201ENST00000585192 84 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 AC079587.1-201ENST00000603846 277 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 U6.73-201ENST00000619194 103 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHOX2BQ99453 CPHL1P-201ENST00000461341 3407 ntBASIC4.3□□□□□ -1.72
PHOX2BQ99453 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.3□□□□□ -1.72
PHOX2BQ99453 MIR450A1-201ENST00000362262 91 ntBASIC4.29□□□□□ -1.72
PHOX2BQ99453 SNORD24-201ENST00000383884 75 ntBASIC4.29□□□□□ -1.72
PHOX2BQ99453 NDUFB1P1-201ENST00000435191 180 ntBASIC4.29□□□□□ -1.72
PHOX2BQ99453 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 MIR7157-201ENST00000635801 60 ntBASIC4.29□□□□□ -1.72
PHOX2BQ99453 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PHOX2BQ99453 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PHOX2BQ99453 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PHOX2BQ99453 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 RNU1-14P-201ENST00000362759 152 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 RPS29P4-201ENST00000414733 161 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 AL139247.1-201ENST00000422768 325 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 MICF-203ENST00000432679 129 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 AC009969.1-201ENST00000438726 172 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 AL133162.1-201ENST00000463228 453 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 Y_RNA.714-201ENST00000517065 90 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 RNU6-1096P-201ENST00000517089 102 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 AC087685.1-201ENST00000587507 141 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 uc_338.28-201ENST00000612082 187 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 AC080128.1-201ENST00000474389 1917 ntBASIC4.28□□□□□ -1.72
PHOX2BQ99453 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PHOX2BQ99453 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHOX2BQ99453 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PHOX2BQ99453 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 RNA5SP125-201ENST00000364843 120 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 Y_RNA.528-201ENST00000384575 108 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 MIR570-201ENST00000384917 97 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 MIR1263-201ENST00000408324 86 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 RN7SKP156-201ENST00000410308 342 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC007064.1-201ENST00000412238 351 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC004552.1-201ENST00000419089 348 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AL157831.1-201ENST00000426134 473 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 RPS15AP28-201ENST00000435088 386 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 RPS26P3-201ENST00000470205 348 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC090543.2-201ENST00000483963 348 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC004057.1-201ENST00000485827 348 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC069240.1-201ENST00000548774 375 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 AC107294.3-201ENST00000609211 526 ntBASIC4.27□□□□□ -1.73
PHOX2BQ99453 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHOX2BQ99453 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.27□□□□□ -1.73
PHOX2BQ99453 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PHOX2BQ99453 RNU6-1107P-201ENST00000364817 104 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 RNU6-546P-201ENST00000383991 107 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 MIR30B-201ENST00000384850 88 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 SNORA57.3-201ENST00000411095 141 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 DBIP2-201ENST00000419076 262 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.26□□□□□ -1.73
PHOX2BQ99453 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.26□□□□□ -1.73
PHOX2BQ99453 HMGN1P7-201ENST00000491722 313 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 AC025445.1-201ENST00000502728 300 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 RNA5SP73-201ENST00000516744 108 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.26□□□□□ -1.73
PHOX2BQ99453 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
PHOX2BQ99453 AC015912.2-201ENST00000571053 181 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 MIR3129-201ENST00000581095 76 ntBASIC4.26□□□□□ -1.73
PHOX2BQ99453 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PHOX2BQ99453 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms