Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNA5SP100-201ENST00000410903 110 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNA5SP59-201ENST00000410922 110 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 AC138393.2-201ENST00000414742 246 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 MTND3P23-201ENST00000431980 347 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 AC098614.3-201ENST00000438957 440 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.62□□□□□ -2.15
RAB40CQ96S21 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 AC027575.1-201ENST00000481064 460 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 Y_RNA.691-201ENST00000516611 103 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 SNORA20.3-201ENST00000516880 132 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.62□□□□□ -2.15
RAB40CQ96S21 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.62□□□□□ -2.15
RAB40CQ96S21 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.62□□□□□ -2.15
RAB40CQ96S21 MIR5094-201ENST00000578766 85 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.62□□□□□ -2.15
RAB40CQ96S21 AC005014.2-201ENST00000607795 599 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 AL590808.1-201ENST00000618696 141 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RAB40CQ96S21 Y_RNA.390-201ENST00000383932 102 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RAB40CQ96S21 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 RNA5SP504-201ENST00000410676 117 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 AC060773.1-201ENST00000421698 310 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 AL356320.1-201ENST00000429616 163 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 USP9YP16-201ENST00000430287 407 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 AL353997.1-201ENST00000432936 108 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 USP9YP23-201ENST00000455085 407 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 Y_RNA.635-201ENST00000459041 101 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 RNU7-57P-201ENST00000459540 60 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 TRBV12-1-201ENST00000479785 344 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 AC116353.2-201ENST00000505332 712 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 RNU6-1041P-201ENST00000516254 102 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 RNA5SP384-201ENST00000516615 116 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 HSBP1P1-201ENST00000555205 166 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 MIR5701-3-201ENST00000578890 82 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.61□□□□□ -2.15
RAB40CQ96S21 MIR5701-1-201ENST00000585138 82 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 MIR5701-2-201ENST00000615634 82 ntBASIC1.61□□□□□ -2.15
RAB40CQ96S21 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RAB40CQ96S21 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-661P-201ENST00000362409 107 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-222P-201ENST00000362438 107 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-862P-201ENST00000362804 105 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNY1P16-201ENST00000363063 111 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-727P-201ENST00000363592 107 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 Y_RNA.404-201ENST00000383978 102 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-331P-201ENST00000384724 107 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 MIR10B-201ENST00000385011 110 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-700P-201ENST00000391043 107 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 SNORA75.4-201ENST00000391278 119 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU4-14P-201ENST00000410858 122 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RN7SKP192-201ENST00000411291 327 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RNU6-57P-201ENST00000411348 103 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 Z98742.3-201ENST00000418637 326 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 HMGN1P12-201ENST00000499125 195 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 AC011406.1-201ENST00000512440 370 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 SUB1P4-201ENST00000566062 339 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 MIR5695-201ENST00000579717 85 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 AC005899.2-201ENST00000584353 90 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 AC064859.1-201ENST00000624741 174 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 AC068205.3-201ENST00000636385 468 ntBASIC1.6□□□□□ -2.15
RAB40CQ96S21 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.6□□□□□ -2.15
RAB40CQ96S21 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RAB40CQ96S21 Y_RNA.106-201ENST00000363189 100 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 SNORD87-201ENST00000364849 89 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 RNU6-793P-201ENST00000384233 104 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 RNA5SP425-201ENST00000410336 112 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC099677.2-201ENST00000436385 175 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC091179.3-201ENST00000474761 144 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC008549.1-201ENST00000512900 643 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 RNU6-1114P-201ENST00000516022 107 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 SCARNA16.2-201ENST00000516520 172 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 RNU6-307P-201ENST00000516743 106 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC105029.1-201ENST00000520250 669 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC069114.2-201ENST00000604699 304 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC016727.1-205ENST00000605437 569 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AL353149.1-201ENST00000610667 244 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 AC006001.4-201ENST00000622243 395 ntBASIC1.59□□□□□ -2.15
RAB40CQ96S21 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
RAB40CQ96S21 Y_RNA.179-201ENST00000363844 90 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 RNU1-96P-201ENST00000364163 162 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 RNA5SP126-201ENST00000365092 109 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 Y_RNA.415-201ENST00000384012 112 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 SNORA70B-201ENST00000384210 135 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 RNU1-139P-201ENST00000391307 165 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms